Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SLC25A1P53007 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC16.68■□□□□ 0.26
SLC25A1P53007 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SLC25A1P53007 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
SLC25A1P53007 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SLC25A1P53007 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SLC25A1P53007 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC16.68■□□□□ 0.26
SLC25A1P53007 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SLC25A1P53007 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.68■□□□□ 0.26
SLC25A1P53007 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.68■□□□□ 0.26
SLC25A1P53007 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SLC25A1P53007 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SLC25A1P53007 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SLC25A1P53007 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SLC25A1P53007 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC16.68■□□□□ 0.26
SLC25A1P53007 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
SLC25A1P53007 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
SLC25A1P53007 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
SLC25A1P53007 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC16.68■□□□□ 0.26
SLC25A1P53007 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
SLC25A1P53007 ABBA01031674.1-201ENST00000635145 728 ntBASIC16.68■□□□□ 0.26
SLC25A1P53007 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SLC25A1P53007 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
SLC25A1P53007 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC16.68■□□□□ 0.26
SLC25A1P53007 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC16.68■□□□□ 0.26
SLC25A1P53007 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SLC25A1P53007 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SLC25A1P53007 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SLC25A1P53007 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC16.68■□□□□ 0.26
SLC25A1P53007 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
SLC25A1P53007 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.67■□□□□ 0.26
SLC25A1P53007 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
SLC25A1P53007 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SLC25A1P53007 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC16.67■□□□□ 0.26
SLC25A1P53007 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SLC25A1P53007 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SLC25A1P53007 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC16.67■□□□□ 0.26
SLC25A1P53007 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SLC25A1P53007 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SLC25A1P53007 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC16.67■□□□□ 0.26
SLC25A1P53007 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC16.67■□□□□ 0.26
SLC25A1P53007 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
SLC25A1P53007 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC16.67■□□□□ 0.26
SLC25A1P53007 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC16.67■□□□□ 0.26
SLC25A1P53007 FDX2-207ENST00000494368 584 ntTSL 4 BASIC16.67■□□□□ 0.26
SLC25A1P53007 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SLC25A1P53007 CKBP1-201ENST00000565489 1086 ntBASIC16.67■□□□□ 0.26
SLC25A1P53007 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC16.67■□□□□ 0.26
SLC25A1P53007 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC16.67■□□□□ 0.26
SLC25A1P53007 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC16.67■□□□□ 0.26
SLC25A1P53007 AL031985.4-201ENST00000642138 673 ntBASIC16.67■□□□□ 0.26
SLC25A1P53007 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SLC25A1P53007 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SLC25A1P53007 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SLC25A1P53007 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SLC25A1P53007 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SLC25A1P53007 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
SLC25A1P53007 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SLC25A1P53007 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC25A1P53007 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SLC25A1P53007 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
SLC25A1P53007 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC25A1P53007 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC16.66■□□□□ 0.26
SLC25A1P53007 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
SLC25A1P53007 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC25A1P53007 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC25A1P53007 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SLC25A1P53007 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC16.66■□□□□ 0.26
SLC25A1P53007 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC25A1P53007 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC25A1P53007 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
SLC25A1P53007 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC16.66■□□□□ 0.26
SLC25A1P53007 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
SLC25A1P53007 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
SLC25A1P53007 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC25A1P53007 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC25A1P53007 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC25A1P53007 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC25A1P53007 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC25A1P53007 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC25A1P53007 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC25A1P53007 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC25A1P53007 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC16.66■□□□□ 0.26
SLC25A1P53007 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
SLC25A1P53007 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
SLC25A1P53007 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.66■□□□□ 0.26
SLC25A1P53007 AC011298.2-201ENST00000617989 482 ntBASIC16.66■□□□□ 0.26
SLC25A1P53007 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC16.66■□□□□ 0.26
SLC25A1P53007 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC25A1P53007 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC25A1P53007 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC16.66■□□□□ 0.26
SLC25A1P53007 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC25A1P53007 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SLC25A1P53007 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC16.65■□□□□ 0.26
SLC25A1P53007 RCC2P3-201ENST00000418112 1537 ntBASIC16.65■□□□□ 0.26
SLC25A1P53007 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC16.65■□□□□ 0.26
SLC25A1P53007 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC16.65■□□□□ 0.26
SLC25A1P53007 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC25A1P53007 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC25A1P53007 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms