Protein–RNA interactions for Protein: P51861

CDR1, Cerebellar degeneration-related antigen 1, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1P51861 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CDR1P51861 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC20.5■□□□□ 0.87
CDR1P51861 GLDC-219ENST00000640208 420 ntTSL 2 BASIC20.5■□□□□ 0.87
CDR1P51861 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
CDR1P51861 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDR1P51861 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDR1P51861 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDR1P51861 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDR1P51861 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CDR1P51861 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDR1P51861 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CDR1P51861 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
CDR1P51861 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDR1P51861 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDR1P51861 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC20.49■□□□□ 0.87
CDR1P51861 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDR1P51861 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
CDR1P51861 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDR1P51861 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC20.49■□□□□ 0.87
CDR1P51861 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDR1P51861 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC20.49■□□□□ 0.87
CDR1P51861 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDR1P51861 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
CDR1P51861 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CDR1P51861 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC20.49■□□□□ 0.87
CDR1P51861 TMA16-209ENST00000513272 803 ntTSL 2 BASIC20.49■□□□□ 0.87
CDR1P51861 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
CDR1P51861 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC20.49■□□□□ 0.87
CDR1P51861 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDR1P51861 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDR1P51861 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDR1P51861 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDR1P51861 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDR1P51861 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.49■□□□□ 0.87
CDR1P51861 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.49■□□□□ 0.87
CDR1P51861 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CDR1P51861 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDR1P51861 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDR1P51861 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC20.49■□□□□ 0.87
CDR1P51861 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CDR1P51861 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDR1P51861 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
CDR1P51861 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDR1P51861 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDR1P51861 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDR1P51861 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDR1P51861 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDR1P51861 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
CDR1P51861 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC20.48■□□□□ 0.87
CDR1P51861 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDR1P51861 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
CDR1P51861 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDR1P51861 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDR1P51861 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDR1P51861 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.48■□□□□ 0.87
CDR1P51861 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC20.48■□□□□ 0.87
CDR1P51861 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC20.48■□□□□ 0.87
CDR1P51861 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
CDR1P51861 FAM207BP-201ENST00000447172 505 ntBASIC20.48■□□□□ 0.87
CDR1P51861 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC20.48■□□□□ 0.87
CDR1P51861 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC20.48■□□□□ 0.87
CDR1P51861 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC20.48■□□□□ 0.87
CDR1P51861 AC026271.3-201ENST00000571884 352 ntBASIC20.48■□□□□ 0.87
CDR1P51861 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC20.48■□□□□ 0.87
CDR1P51861 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CDR1P51861 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC20.48■□□□□ 0.87
CDR1P51861 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDR1P51861 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
CDR1P51861 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC20.48■□□□□ 0.87
CDR1P51861 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.48■□□□□ 0.87
CDR1P51861 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC20.48■□□□□ 0.87
CDR1P51861 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CDR1P51861 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC20.48■□□□□ 0.87
CDR1P51861 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDR1P51861 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDR1P51861 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDR1P51861 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDR1P51861 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.47■□□□□ 0.87
CDR1P51861 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDR1P51861 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC20.47■□□□□ 0.87
CDR1P51861 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
CDR1P51861 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDR1P51861 MFAP1P1-201ENST00000442257 1255 ntBASIC20.47■□□□□ 0.87
CDR1P51861 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC20.47■□□□□ 0.87
CDR1P51861 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
CDR1P51861 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDR1P51861 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC20.47■□□□□ 0.87
CDR1P51861 AC145285.6-201ENST00000604632 637 ntBASIC20.47■□□□□ 0.87
CDR1P51861 AC010331.1-201ENST00000611423 582 ntBASIC20.47■□□□□ 0.87
CDR1P51861 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC20.47■□□□□ 0.87
CDR1P51861 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDR1P51861 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CDR1P51861 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDR1P51861 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDR1P51861 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDR1P51861 KRT8P41-201ENST00000533985 1514 ntBASIC20.47■□□□□ 0.87
CDR1P51861 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC20.47■□□□□ 0.87
CDR1P51861 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDR1P51861 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CDR1P51861 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms