Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC21.19■□□□□ 0.98
USP11P51784 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC21.19■□□□□ 0.98
USP11P51784 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC21.19■□□□□ 0.98
USP11P51784 YBX1P2-201ENST00000489612 999 ntBASIC21.19■□□□□ 0.98
USP11P51784 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC21.19■□□□□ 0.98
USP11P51784 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC21.19■□□□□ 0.98
USP11P51784 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
USP11P51784 AC011558.1-201ENST00000623459 338 ntBASIC21.19■□□□□ 0.98
USP11P51784 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
USP11P51784 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
USP11P51784 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
USP11P51784 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
USP11P51784 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
USP11P51784 AC098818.2-201ENST00000564925 2320 ntBASIC21.18■□□□□ 0.98
USP11P51784 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
USP11P51784 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
USP11P51784 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
USP11P51784 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
USP11P51784 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
USP11P51784 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
USP11P51784 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
USP11P51784 GRAMD4P1-201ENST00000435181 1110 ntBASIC21.18■□□□□ 0.98
USP11P51784 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC21.18■□□□□ 0.98
USP11P51784 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC21.18■□□□□ 0.98
USP11P51784 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC21.18■□□□□ 0.98
USP11P51784 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC21.18■□□□□ 0.98
USP11P51784 AC112497.1-201ENST00000624824 639 ntBASIC21.18■□□□□ 0.98
USP11P51784 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC21.18■□□□□ 0.98
USP11P51784 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC21.18■□□□□ 0.98
USP11P51784 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
USP11P51784 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC21.18■□□□□ 0.98
USP11P51784 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
USP11P51784 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
USP11P51784 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
USP11P51784 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
USP11P51784 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC21.18■□□□□ 0.98
USP11P51784 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC21.18■□□□□ 0.98
USP11P51784 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
USP11P51784 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
USP11P51784 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
USP11P51784 CROCCP3-202ENST00000420820 1947 ntBASIC21.17■□□□□ 0.98
USP11P51784 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
USP11P51784 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC21.17■□□□□ 0.98
USP11P51784 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
USP11P51784 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
USP11P51784 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
USP11P51784 ANKRD20A18P-201ENST00000359341 492 ntBASIC21.17■□□□□ 0.98
USP11P51784 RNF152P1-201ENST00000397754 604 ntBASIC21.17■□□□□ 0.98
USP11P51784 AK4P3-201ENST00000418260 669 ntBASIC21.17■□□□□ 0.98
USP11P51784 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC21.17■□□□□ 0.98
USP11P51784 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC21.17■□□□□ 0.98
USP11P51784 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC21.17■□□□□ 0.98
USP11P51784 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC21.17■□□□□ 0.98
USP11P51784 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC21.17■□□□□ 0.98
USP11P51784 LTBR-211ENST00000543190 785 ntTSL 3 BASIC21.17■□□□□ 0.98
USP11P51784 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC21.17■□□□□ 0.98
USP11P51784 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC21.17■□□□□ 0.98
USP11P51784 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
USP11P51784 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
USP11P51784 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
USP11P51784 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
USP11P51784 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC21.17■□□□□ 0.98
USP11P51784 AL020996.1-203ENST00000536896 2307 ntBASIC21.17■□□□□ 0.98
USP11P51784 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
USP11P51784 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
USP11P51784 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
USP11P51784 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC21.16■□□□□ 0.98
USP11P51784 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
USP11P51784 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
USP11P51784 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC21.16■□□□□ 0.98
USP11P51784 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC21.16■□□□□ 0.98
USP11P51784 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
USP11P51784 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
USP11P51784 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
USP11P51784 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC21.16■□□□□ 0.98
USP11P51784 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
USP11P51784 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
USP11P51784 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
USP11P51784 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
USP11P51784 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
USP11P51784 TSPY5P-201ENST00000426936 936 ntBASIC21.16■□□□□ 0.98
USP11P51784 KRT18P23-201ENST00000435622 1283 ntBASIC21.16■□□□□ 0.98
USP11P51784 AL441883.1-201ENST00000566170 1045 ntBASIC21.16■□□□□ 0.98
USP11P51784 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
USP11P51784 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC21.16■□□□□ 0.98
USP11P51784 AL023973.1-201ENST00000624619 620 ntBASIC21.16■□□□□ 0.98
USP11P51784 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC21.16■□□□□ 0.98
USP11P51784 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
USP11P51784 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
USP11P51784 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
USP11P51784 AL031598.1-201ENST00000561511 1773 ntBASIC21.15■□□□□ 0.98
USP11P51784 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC21.15■□□□□ 0.98
USP11P51784 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC21.15■□□□□ 0.98
USP11P51784 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
USP11P51784 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
USP11P51784 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC21.15■□□□□ 0.98
USP11P51784 DUX4L26-201ENST00000489078 1255 ntBASIC21.15■□□□□ 0.98
USP11P51784 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC21.15■□□□□ 0.98
USP11P51784 ETFA-216ENST00000560726 942 ntTSL 3 BASIC21.15■□□□□ 0.98
USP11P51784 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms