Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC17.44■□□□□ 0.38
RNF144AP50876 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.44■□□□□ 0.38
RNF144AP50876 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.44■□□□□ 0.38
RNF144AP50876 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
RNF144AP50876 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.44■□□□□ 0.38
RNF144AP50876 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
RNF144AP50876 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RNF144AP50876 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RNF144AP50876 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RNF144AP50876 AL135905.2-201ENST00000584934 1404 ntBASIC17.44■□□□□ 0.38
RNF144AP50876 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RNF144AP50876 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
RNF144AP50876 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.44■□□□□ 0.38
RNF144AP50876 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RNF144AP50876 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RNF144AP50876 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.44■□□□□ 0.38
RNF144AP50876 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.44■□□□□ 0.38
RNF144AP50876 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RNF144AP50876 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC17.44■□□□□ 0.38
RNF144AP50876 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RNF144AP50876 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RNF144AP50876 AC079598.2-202ENST00000546624 1451 ntBASIC17.44■□□□□ 0.38
RNF144AP50876 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC17.44■□□□□ 0.38
RNF144AP50876 HTR7P1-202ENST00000624664 4411 ntBASIC17.44■□□□□ 0.38
RNF144AP50876 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
RNF144AP50876 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RNF144AP50876 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RNF144AP50876 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RNF144AP50876 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RNF144AP50876 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
RNF144AP50876 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
RNF144AP50876 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RNF144AP50876 AL512353.2-201ENST00000448759 1962 ntBASIC17.43■□□□□ 0.38
RNF144AP50876 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RNF144AP50876 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RNF144AP50876 AC012618.2-201ENST00000428058 849 ntBASIC17.43■□□□□ 0.38
RNF144AP50876 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.43■□□□□ 0.38
RNF144AP50876 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RNF144AP50876 SLC25A1P4-201ENST00000567977 778 ntBASIC17.43■□□□□ 0.38
RNF144AP50876 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RNF144AP50876 AC026471.5-201ENST00000615068 467 ntBASIC17.43■□□□□ 0.38
RNF144AP50876 REXO1L10P-201ENST00000615707 1290 ntBASIC17.43■□□□□ 0.38
RNF144AP50876 AC130371.2-201ENST00000619443 611 ntBASIC17.43■□□□□ 0.38
RNF144AP50876 REXO1L12P-201ENST00000622156 912 ntBASIC17.43■□□□□ 0.38
RNF144AP50876 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
RNF144AP50876 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RNF144AP50876 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
RNF144AP50876 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
RNF144AP50876 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RNF144AP50876 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RNF144AP50876 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
RNF144AP50876 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RNF144AP50876 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
RNF144AP50876 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
RNF144AP50876 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
RNF144AP50876 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RNF144AP50876 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RNF144AP50876 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RNF144AP50876 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RNF144AP50876 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.42■□□□□ 0.38
RNF144AP50876 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RNF144AP50876 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNF144AP50876 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
RNF144AP50876 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNF144AP50876 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNF144AP50876 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RNF144AP50876 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNF144AP50876 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNF144AP50876 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
RNF144AP50876 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNF144AP50876 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
RNF144AP50876 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNF144AP50876 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
RNF144AP50876 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RNF144AP50876 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RNF144AP50876 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC17.42■□□□□ 0.38
RNF144AP50876 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC17.42■□□□□ 0.38
RNF144AP50876 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC17.42■□□□□ 0.38
RNF144AP50876 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.42■□□□□ 0.38
RNF144AP50876 NUDT16P1-203ENST00000513809 620 ntBASIC17.42■□□□□ 0.38
RNF144AP50876 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.42■□□□□ 0.38
RNF144AP50876 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC17.42■□□□□ 0.38
RNF144AP50876 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.42■□□□□ 0.38
RNF144AP50876 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNF144AP50876 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNF144AP50876 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
RNF144AP50876 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.42■□□□□ 0.38
RNF144AP50876 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.42■□□□□ 0.38
RNF144AP50876 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNF144AP50876 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNF144AP50876 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.41■□□□□ 0.38
RNF144AP50876 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF144AP50876 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.41■□□□□ 0.38
RNF144AP50876 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF144AP50876 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.41■□□□□ 0.38
RNF144AP50876 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF144AP50876 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF144AP50876 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF144AP50876 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF144AP50876 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms