Protein–RNA interactions for Protein: P48067

SLC6A9, Sodium- and chloride-dependent glycine transporter 1, humanhuman

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A9P48067 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC6A9P48067 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SLC6A9P48067 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC6A9P48067 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
SLC6A9P48067 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SLC6A9P48067 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC6A9P48067 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC6A9P48067 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC6A9P48067 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC16.59■□□□□ 0.25
SLC6A9P48067 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC6A9P48067 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC16.59■□□□□ 0.25
SLC6A9P48067 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC6A9P48067 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC6A9P48067 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SLC6A9P48067 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC6A9P48067 CROCCP3-202ENST00000420820 1947 ntBASIC16.59■□□□□ 0.25
SLC6A9P48067 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
SLC6A9P48067 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SLC6A9P48067 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC6A9P48067 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC16.59■□□□□ 0.25
SLC6A9P48067 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC6A9P48067 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC6A9P48067 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC6A9P48067 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SLC6A9P48067 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SLC6A9P48067 NIFKP9-201ENST00000419265 221 ntBASIC16.59■□□□□ 0.25
SLC6A9P48067 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC16.59■□□□□ 0.25
SLC6A9P48067 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC16.59■□□□□ 0.25
SLC6A9P48067 RPS2P4-201ENST00000476944 856 ntBASIC16.59■□□□□ 0.25
SLC6A9P48067 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
SLC6A9P48067 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SLC6A9P48067 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SLC6A9P48067 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC16.59■□□□□ 0.25
SLC6A9P48067 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC16.59■□□□□ 0.25
SLC6A9P48067 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SLC6A9P48067 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC16.59■□□□□ 0.25
SLC6A9P48067 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC16.59■□□□□ 0.25
SLC6A9P48067 AL445675.2-201ENST00000620291 557 ntBASIC16.59■□□□□ 0.25
SLC6A9P48067 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC16.59■□□□□ 0.25
SLC6A9P48067 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC6A9P48067 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC16.59■□□□□ 0.25
SLC6A9P48067 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC16.59■□□□□ 0.25
SLC6A9P48067 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SLC6A9P48067 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC6A9P48067 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
SLC6A9P48067 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC6A9P48067 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.59■□□□□ 0.25
SLC6A9P48067 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SLC6A9P48067 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC6A9P48067 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
SLC6A9P48067 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
SLC6A9P48067 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.58■□□□□ 0.25
SLC6A9P48067 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
SLC6A9P48067 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC16.58■□□□□ 0.25
SLC6A9P48067 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
SLC6A9P48067 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC16.58■□□□□ 0.24
SLC6A9P48067 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC16.58■□□□□ 0.24
SLC6A9P48067 AC008550.1-201ENST00000511500 884 ntBASIC16.58■□□□□ 0.24
SLC6A9P48067 TK2-204ENST00000525974 1178 ntTSL 2 BASIC16.58■□□□□ 0.24
SLC6A9P48067 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC16.58■□□□□ 0.24
SLC6A9P48067 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC16.58■□□□□ 0.24
SLC6A9P48067 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
SLC6A9P48067 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SLC6A9P48067 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SLC6A9P48067 GAS2L1P1-201ENST00000420145 1480 ntBASIC16.58■□□□□ 0.24
SLC6A9P48067 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SLC6A9P48067 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SLC6A9P48067 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SLC6A9P48067 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SLC6A9P48067 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SLC6A9P48067 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SLC6A9P48067 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SLC6A9P48067 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SLC6A9P48067 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SLC6A9P48067 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
SLC6A9P48067 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SLC6A9P48067 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SLC6A9P48067 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC16.58■□□□□ 0.24
SLC6A9P48067 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
SLC6A9P48067 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC16.58■□□□□ 0.24
SLC6A9P48067 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
SLC6A9P48067 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
SLC6A9P48067 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
SLC6A9P48067 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
SLC6A9P48067 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC16.57■□□□□ 0.24
SLC6A9P48067 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SLC6A9P48067 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SLC6A9P48067 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SLC6A9P48067 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC16.57■□□□□ 0.24
SLC6A9P48067 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SLC6A9P48067 KRT8P41-201ENST00000533985 1514 ntBASIC16.57■□□□□ 0.24
SLC6A9P48067 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SLC6A9P48067 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SLC6A9P48067 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC16.57■□□□□ 0.24
SLC6A9P48067 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SLC6A9P48067 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SLC6A9P48067 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SLC6A9P48067 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SLC6A9P48067 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC16.57■□□□□ 0.24
SLC6A9P48067 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms