Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC20.69■□□□□ 0.9
RFC5P40937 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC20.69■□□□□ 0.9
RFC5P40937 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RFC5P40937 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RFC5P40937 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RFC5P40937 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC20.68■□□□□ 0.9
RFC5P40937 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
RFC5P40937 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
RFC5P40937 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.68■□□□□ 0.9
RFC5P40937 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RFC5P40937 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RFC5P40937 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RFC5P40937 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RFC5P40937 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
RFC5P40937 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RFC5P40937 AL031133.1-201ENST00000406807 723 ntBASIC20.68■□□□□ 0.9
RFC5P40937 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC20.68■□□□□ 0.9
RFC5P40937 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RFC5P40937 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RFC5P40937 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC20.68■□□□□ 0.9
RFC5P40937 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
RFC5P40937 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RFC5P40937 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RFC5P40937 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RFC5P40937 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RFC5P40937 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RFC5P40937 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RFC5P40937 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
RFC5P40937 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RFC5P40937 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RFC5P40937 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
RFC5P40937 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RFC5P40937 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
RFC5P40937 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC20.67■□□□□ 0.9
RFC5P40937 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
RFC5P40937 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RFC5P40937 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.67■□□□□ 0.9
RFC5P40937 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RFC5P40937 USP39-202ENST00000409025 1946 ntTSL 5 BASIC20.67■□□□□ 0.9
RFC5P40937 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RFC5P40937 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RFC5P40937 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.67■□□□□ 0.9
RFC5P40937 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RFC5P40937 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
RFC5P40937 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
RFC5P40937 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RFC5P40937 SPDYE15P-201ENST00000424157 909 ntBASIC20.67■□□□□ 0.9
RFC5P40937 AL671277.2-201ENST00000458060 996 ntBASIC20.67■□□□□ 0.9
RFC5P40937 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC20.67■□□□□ 0.9
RFC5P40937 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC20.67■□□□□ 0.9
RFC5P40937 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RFC5P40937 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC20.67■□□□□ 0.9
RFC5P40937 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RFC5P40937 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
RFC5P40937 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RFC5P40937 MTMR9LP-203ENST00000426597 1545 ntBASIC20.67■□□□□ 0.9
RFC5P40937 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.67■□□□□ 0.9
RFC5P40937 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RFC5P40937 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
RFC5P40937 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC20.67■□□□□ 0.9
RFC5P40937 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RFC5P40937 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
RFC5P40937 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RFC5P40937 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RFC5P40937 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC20.66■□□□□ 0.9
RFC5P40937 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RFC5P40937 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC20.66■□□□□ 0.9
RFC5P40937 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RFC5P40937 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RFC5P40937 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RFC5P40937 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
RFC5P40937 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC20.66■□□□□ 0.9
RFC5P40937 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RFC5P40937 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
RFC5P40937 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RFC5P40937 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC20.66■□□□□ 0.9
RFC5P40937 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RFC5P40937 RASA4DP-201ENST00000460726 1199 ntBASIC20.66■□□□□ 0.9
RFC5P40937 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC20.66■□□□□ 0.9
RFC5P40937 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC20.66■□□□□ 0.9
RFC5P40937 AC104390.1-201ENST00000555663 520 ntBASIC20.66■□□□□ 0.9
RFC5P40937 CLN6-204ENST00000564752 900 ntTSL 3 BASIC20.66■□□□□ 0.9
RFC5P40937 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC20.66■□□□□ 0.9
RFC5P40937 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RFC5P40937 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC20.66■□□□□ 0.9
RFC5P40937 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RFC5P40937 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
RFC5P40937 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
RFC5P40937 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RFC5P40937 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC20.66■□□□□ 0.9
RFC5P40937 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RFC5P40937 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RFC5P40937 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RFC5P40937 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RFC5P40937 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
RFC5P40937 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RFC5P40937 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
RFC5P40937 AC006333.2-201ENST00000607957 2099 ntBASIC20.65■□□□□ 0.9
RFC5P40937 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RFC5P40937 Z98044.1-201ENST00000632503 1764 ntBASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms