Protein–RNA interactions for Protein: P39086

GRIK1, Glutamate receptor ionotropic, kainate 1, humanhuman

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK1P39086 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
GRIK1P39086 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
GRIK1P39086 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.76■□□□□ 0.75
GRIK1P39086 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
GRIK1P39086 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
GRIK1P39086 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC19.76■□□□□ 0.75
GRIK1P39086 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
GRIK1P39086 AL049812.1-201ENST00000432563 2267 ntBASIC19.76■□□□□ 0.75
GRIK1P39086 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.75■□□□□ 0.75
GRIK1P39086 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.75■□□□□ 0.75
GRIK1P39086 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
GRIK1P39086 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
GRIK1P39086 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
GRIK1P39086 AL031133.1-201ENST00000406807 723 ntBASIC19.75■□□□□ 0.75
GRIK1P39086 KRT18P38-201ENST00000449496 1282 ntBASIC19.75■□□□□ 0.75
GRIK1P39086 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
GRIK1P39086 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
GRIK1P39086 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC19.75■□□□□ 0.75
GRIK1P39086 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC19.75■□□□□ 0.75
GRIK1P39086 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC19.75■□□□□ 0.75
GRIK1P39086 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
GRIK1P39086 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC19.75■□□□□ 0.75
GRIK1P39086 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.75■□□□□ 0.75
GRIK1P39086 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
GRIK1P39086 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
GRIK1P39086 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.75■□□□□ 0.75
GRIK1P39086 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
GRIK1P39086 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
GRIK1P39086 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
GRIK1P39086 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
GRIK1P39086 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
GRIK1P39086 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
GRIK1P39086 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
GRIK1P39086 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.74■□□□□ 0.75
GRIK1P39086 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
GRIK1P39086 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
GRIK1P39086 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
GRIK1P39086 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
GRIK1P39086 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
GRIK1P39086 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.74■□□□□ 0.75
GRIK1P39086 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC19.74■□□□□ 0.75
GRIK1P39086 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
GRIK1P39086 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
GRIK1P39086 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC19.74■□□□□ 0.75
GRIK1P39086 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
GRIK1P39086 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC19.74■□□□□ 0.75
GRIK1P39086 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
GRIK1P39086 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
GRIK1P39086 AC112497.1-201ENST00000624824 639 ntBASIC19.74■□□□□ 0.75
GRIK1P39086 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
GRIK1P39086 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
GRIK1P39086 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
GRIK1P39086 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.74■□□□□ 0.75
GRIK1P39086 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC19.74■□□□□ 0.75
GRIK1P39086 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
GRIK1P39086 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC19.74■□□□□ 0.75
GRIK1P39086 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
GRIK1P39086 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.73■□□□□ 0.75
GRIK1P39086 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
GRIK1P39086 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
GRIK1P39086 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
GRIK1P39086 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
GRIK1P39086 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
GRIK1P39086 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC19.73■□□□□ 0.75
GRIK1P39086 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
GRIK1P39086 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
GRIK1P39086 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.73■□□□□ 0.75
GRIK1P39086 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
GRIK1P39086 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC19.73■□□□□ 0.75
GRIK1P39086 STARP1-201ENST00000397973 869 ntBASIC19.73■□□□□ 0.75
GRIK1P39086 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.73■□□□□ 0.75
GRIK1P39086 AL671277.2-201ENST00000458060 996 ntBASIC19.73■□□□□ 0.75
GRIK1P39086 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC19.73■□□□□ 0.75
GRIK1P39086 CD81-212ENST00000526072 1172 ntTSL 5 BASIC19.73■□□□□ 0.75
GRIK1P39086 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC19.73■□□□□ 0.75
GRIK1P39086 CLN6-204ENST00000564752 900 ntTSL 3 BASIC19.73■□□□□ 0.75
GRIK1P39086 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
GRIK1P39086 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
GRIK1P39086 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC19.73■□□□□ 0.75
GRIK1P39086 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.73■□□□□ 0.75
GRIK1P39086 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
GRIK1P39086 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
GRIK1P39086 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
GRIK1P39086 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
GRIK1P39086 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC19.73■□□□□ 0.75
GRIK1P39086 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.73■□□□□ 0.75
GRIK1P39086 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
GRIK1P39086 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
GRIK1P39086 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
GRIK1P39086 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
GRIK1P39086 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
GRIK1P39086 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
GRIK1P39086 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.72■□□□□ 0.75
GRIK1P39086 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
GRIK1P39086 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
GRIK1P39086 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.72■□□□□ 0.75
GRIK1P39086 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.72■□□□□ 0.75
GRIK1P39086 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
GRIK1P39086 MIR564-202ENST00000385049 94 ntBASIC19.72■□□□□ 0.75
GRIK1P39086 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms