Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ABCD3P28288 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ABCD3P28288 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ABCD3P28288 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ABCD3P28288 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ABCD3P28288 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
ABCD3P28288 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
ABCD3P28288 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ABCD3P28288 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.27■□□□□ 0.36
ABCD3P28288 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
ABCD3P28288 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
ABCD3P28288 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ABCD3P28288 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ABCD3P28288 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.27■□□□□ 0.36
ABCD3P28288 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.27■□□□□ 0.36
ABCD3P28288 AC098818.2-201ENST00000564925 2320 ntBASIC17.27■□□□□ 0.35
ABCD3P28288 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
ABCD3P28288 AC073508.3-201ENST00000619697 1419 ntBASIC17.27■□□□□ 0.35
ABCD3P28288 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ABCD3P28288 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ABCD3P28288 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
ABCD3P28288 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
ABCD3P28288 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
ABCD3P28288 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
ABCD3P28288 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.27■□□□□ 0.35
ABCD3P28288 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.27■□□□□ 0.35
ABCD3P28288 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.27■□□□□ 0.35
ABCD3P28288 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ABCD3P28288 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
ABCD3P28288 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ABCD3P28288 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ABCD3P28288 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.26■□□□□ 0.35
ABCD3P28288 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.26■□□□□ 0.35
ABCD3P28288 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC17.26■□□□□ 0.35
ABCD3P28288 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ABCD3P28288 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ABCD3P28288 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ABCD3P28288 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
ABCD3P28288 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.26■□□□□ 0.35
ABCD3P28288 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
ABCD3P28288 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
ABCD3P28288 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ABCD3P28288 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.26■□□□□ 0.35
ABCD3P28288 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ABCD3P28288 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.26■□□□□ 0.35
ABCD3P28288 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.26■□□□□ 0.35
ABCD3P28288 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.26■□□□□ 0.35
ABCD3P28288 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC17.26■□□□□ 0.35
ABCD3P28288 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
ABCD3P28288 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
ABCD3P28288 AL138966.2-201ENST00000621997 464 ntBASIC17.26■□□□□ 0.35
ABCD3P28288 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ABCD3P28288 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ABCD3P28288 MTMR9LP-203ENST00000426597 1545 ntBASIC17.26■□□□□ 0.35
ABCD3P28288 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
ABCD3P28288 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ABCD3P28288 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
ABCD3P28288 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ABCD3P28288 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ABCD3P28288 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ABCD3P28288 LGALS8-AS1-201ENST00000487567 1457 ntBASIC17.25■□□□□ 0.35
ABCD3P28288 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
ABCD3P28288 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ABCD3P28288 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
ABCD3P28288 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.25■□□□□ 0.35
ABCD3P28288 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ABCD3P28288 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ABCD3P28288 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
ABCD3P28288 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ABCD3P28288 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ABCD3P28288 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ABCD3P28288 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
ABCD3P28288 RCN1P1-201ENST00000400413 996 ntBASIC17.25■□□□□ 0.35
ABCD3P28288 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ABCD3P28288 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC17.25■□□□□ 0.35
ABCD3P28288 KRT18P57-201ENST00000443599 1254 ntBASIC17.25■□□□□ 0.35
ABCD3P28288 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.25■□□□□ 0.35
ABCD3P28288 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.25■□□□□ 0.35
ABCD3P28288 TK2-213ENST00000563369 882 ntTSL 5 BASIC17.25■□□□□ 0.35
ABCD3P28288 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.25■□□□□ 0.35
ABCD3P28288 AC092865.7-201ENST00000641832 219 ntBASIC17.25■□□□□ 0.35
ABCD3P28288 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ABCD3P28288 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ABCD3P28288 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
ABCD3P28288 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.25■□□□□ 0.35
ABCD3P28288 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.25■□□□□ 0.35
ABCD3P28288 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ABCD3P28288 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ABCD3P28288 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
ABCD3P28288 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC17.24■□□□□ 0.35
ABCD3P28288 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.24■□□□□ 0.35
ABCD3P28288 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ABCD3P28288 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ABCD3P28288 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.24■□□□□ 0.35
ABCD3P28288 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
ABCD3P28288 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ABCD3P28288 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ABCD3P28288 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC17.24■□□□□ 0.35
ABCD3P28288 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.24■□□□□ 0.35
ABCD3P28288 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms