Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PTPN3P26045 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC19.13■□□□□ 0.65
PTPN3P26045 CA15P1-201ENST00000481698 905 ntBASIC19.13■□□□□ 0.65
PTPN3P26045 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
PTPN3P26045 DET1-205ENST00000558413 583 ntTSL 4 BASIC19.13■□□□□ 0.65
PTPN3P26045 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.13■□□□□ 0.65
PTPN3P26045 AP000525.1-201ENST00000608286 694 ntBASIC19.13■□□□□ 0.65
PTPN3P26045 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.13■□□□□ 0.65
PTPN3P26045 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
PTPN3P26045 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PTPN3P26045 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PTPN3P26045 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PTPN3P26045 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
PTPN3P26045 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.13■□□□□ 0.65
PTPN3P26045 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PTPN3P26045 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.13■□□□□ 0.65
PTPN3P26045 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PTPN3P26045 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PTPN3P26045 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PTPN3P26045 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
PTPN3P26045 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PTPN3P26045 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PTPN3P26045 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PTPN3P26045 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.12■□□□□ 0.65
PTPN3P26045 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.12■□□□□ 0.65
PTPN3P26045 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PTPN3P26045 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PTPN3P26045 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.12■□□□□ 0.65
PTPN3P26045 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PTPN3P26045 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PTPN3P26045 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PTPN3P26045 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PTPN3P26045 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PTPN3P26045 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC19.12■□□□□ 0.65
PTPN3P26045 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.12■□□□□ 0.65
PTPN3P26045 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PTPN3P26045 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
PTPN3P26045 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
PTPN3P26045 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PTPN3P26045 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.12■□□□□ 0.65
PTPN3P26045 AL355075.4-201ENST00000554988 638 ntBASIC19.12■□□□□ 0.65
PTPN3P26045 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PTPN3P26045 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC19.12■□□□□ 0.65
PTPN3P26045 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PTPN3P26045 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.12■□□□□ 0.65
PTPN3P26045 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
PTPN3P26045 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PTPN3P26045 AC008556.1-201ENST00000610908 2040 ntBASIC19.12■□□□□ 0.65
PTPN3P26045 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19.11■□□□□ 0.65
PTPN3P26045 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC19.11■□□□□ 0.65
PTPN3P26045 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.11■□□□□ 0.65
PTPN3P26045 GPAT2P1-201ENST00000444924 1672 ntBASIC19.11■□□□□ 0.65
PTPN3P26045 AL109659.2-201ENST00000606809 1674 ntBASIC19.11■□□□□ 0.65
PTPN3P26045 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
PTPN3P26045 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PTPN3P26045 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PTPN3P26045 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.11■□□□□ 0.65
PTPN3P26045 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PTPN3P26045 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.11■□□□□ 0.65
PTPN3P26045 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PTPN3P26045 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
PTPN3P26045 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC19.11■□□□□ 0.65
PTPN3P26045 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19.11■□□□□ 0.65
PTPN3P26045 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PTPN3P26045 AL023284.2-201ENST00000405850 579 ntBASIC19.11■□□□□ 0.65
PTPN3P26045 AL390955.1-201ENST00000428694 934 ntBASIC19.11■□□□□ 0.65
PTPN3P26045 MIR4497-201ENST00000583208 89 ntBASIC19.11■□□□□ 0.65
PTPN3P26045 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PTPN3P26045 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PTPN3P26045 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PTPN3P26045 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PTPN3P26045 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.11■□□□□ 0.65
PTPN3P26045 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PTPN3P26045 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PTPN3P26045 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PTPN3P26045 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
PTPN3P26045 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.11■□□□□ 0.65
PTPN3P26045 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PTPN3P26045 NEFHP1-201ENST00000412845 2629 ntBASIC19.11■□□□□ 0.65
PTPN3P26045 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PTPN3P26045 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PTPN3P26045 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PTPN3P26045 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
PTPN3P26045 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
PTPN3P26045 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PTPN3P26045 AC126763.1-201ENST00000552015 2118 ntBASIC19.1■□□□□ 0.65
PTPN3P26045 AC090164.3-201ENST00000610780 2143 ntBASIC19.1■□□□□ 0.65
PTPN3P26045 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.1■□□□□ 0.65
PTPN3P26045 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PTPN3P26045 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
PTPN3P26045 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PTPN3P26045 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC19.1■□□□□ 0.65
PTPN3P26045 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.1■□□□□ 0.65
PTPN3P26045 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
PTPN3P26045 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PTPN3P26045 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
PTPN3P26045 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PTPN3P26045 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PTPN3P26045 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PTPN3P26045 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms