Protein–RNA interactions for Protein: P19397

CD53, Leukocyte surface antigen CD53, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD53P19397 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CD53P19397 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CD53P19397 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.04■□□□□ 0.32
CD53P19397 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CD53P19397 FP475955.4-201ENST00000623131 1990 ntBASIC17.04■□□□□ 0.32
CD53P19397 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CD53P19397 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CD53P19397 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.04■□□□□ 0.32
CD53P19397 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CD53P19397 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.04■□□□□ 0.32
CD53P19397 RNF146-204ENST00000476956 884 ntTSL 2 BASIC17.04■□□□□ 0.32
CD53P19397 DUT-205ENST00000558813 769 ntTSL 2 BASIC17.04■□□□□ 0.32
CD53P19397 NME3-204ENST00000563498 920 ntTSL 2 BASIC17.04■□□□□ 0.32
CD53P19397 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CD53P19397 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CD53P19397 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.04■□□□□ 0.32
CD53P19397 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.04■□□□□ 0.32
CD53P19397 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CD53P19397 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
CD53P19397 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CD53P19397 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CD53P19397 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.04■□□□□ 0.32
CD53P19397 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CD53P19397 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CD53P19397 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
CD53P19397 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CD53P19397 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.03■□□□□ 0.32
CD53P19397 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CD53P19397 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.03■□□□□ 0.32
CD53P19397 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CD53P19397 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CD53P19397 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC17.03■□□□□ 0.32
CD53P19397 IRX1P1-201ENST00000438849 1838 ntBASIC17.03■□□□□ 0.32
CD53P19397 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CD53P19397 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC17.03■□□□□ 0.32
CD53P19397 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CD53P19397 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CD53P19397 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
CD53P19397 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CD53P19397 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CD53P19397 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CD53P19397 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CD53P19397 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC17.03■□□□□ 0.32
CD53P19397 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.03■□□□□ 0.32
CD53P19397 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC17.03■□□□□ 0.32
CD53P19397 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CD53P19397 KRT18P57-201ENST00000443599 1254 ntBASIC17.03■□□□□ 0.32
CD53P19397 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.03■□□□□ 0.32
CD53P19397 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.03■□□□□ 0.32
CD53P19397 NAPSB-206ENST00000562112 1266 ntBASIC17.03■□□□□ 0.32
CD53P19397 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CD53P19397 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.03■□□□□ 0.32
CD53P19397 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CD53P19397 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
CD53P19397 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.03■□□□□ 0.32
CD53P19397 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.03■□□□□ 0.32
CD53P19397 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CD53P19397 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.03■□□□□ 0.32
CD53P19397 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CD53P19397 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CD53P19397 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CD53P19397 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.03■□□□□ 0.32
CD53P19397 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.02■□□□□ 0.32
CD53P19397 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CD53P19397 KRT18P22-201ENST00000402024 1347 ntBASIC17.02■□□□□ 0.32
CD53P19397 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CD53P19397 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC17.02■□□□□ 0.32
CD53P19397 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CD53P19397 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.02■□□□□ 0.32
CD53P19397 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CD53P19397 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CD53P19397 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.02■□□□□ 0.32
CD53P19397 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC17.02■□□□□ 0.32
CD53P19397 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC17.02■□□□□ 0.32
CD53P19397 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.02■□□□□ 0.32
CD53P19397 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC17.02■□□□□ 0.32
CD53P19397 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC17.02■□□□□ 0.32
CD53P19397 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC17.02■□□□□ 0.32
CD53P19397 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.02■□□□□ 0.32
CD53P19397 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
CD53P19397 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CD53P19397 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
CD53P19397 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.02■□□□□ 0.31
CD53P19397 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
CD53P19397 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.02■□□□□ 0.31
CD53P19397 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CD53P19397 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CD53P19397 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.02■□□□□ 0.31
CD53P19397 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CD53P19397 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
CD53P19397 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.01■□□□□ 0.31
CD53P19397 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CD53P19397 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CD53P19397 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CD53P19397 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CD53P19397 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CD53P19397 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CD53P19397 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.01■□□□□ 0.31
CD53P19397 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.01■□□□□ 0.31
CD53P19397 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms