Protein–RNA interactions for Protein: P16104

H2AFX, Histone H2AX, humanhuman

Predicted RBP Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFXP16104 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
H2AFXP16104 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
H2AFXP16104 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
H2AFXP16104 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
H2AFXP16104 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
H2AFXP16104 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
H2AFXP16104 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
H2AFXP16104 AP001330.3-201ENST00000520123 633 ntBASIC19.5■□□□□ 0.71
H2AFXP16104 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC19.5■□□□□ 0.71
H2AFXP16104 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
H2AFXP16104 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
H2AFXP16104 MIR6084-201ENST00000622012 110 ntBASIC19.5■□□□□ 0.71
H2AFXP16104 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
H2AFXP16104 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC19.5■□□□□ 0.71
H2AFXP16104 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
H2AFXP16104 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.5■□□□□ 0.71
H2AFXP16104 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
H2AFXP16104 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
H2AFXP16104 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
H2AFXP16104 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
H2AFXP16104 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
H2AFXP16104 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
H2AFXP16104 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC19.5■□□□□ 0.71
H2AFXP16104 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
H2AFXP16104 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC19.5■□□□□ 0.71
H2AFXP16104 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
H2AFXP16104 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
H2AFXP16104 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
H2AFXP16104 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
H2AFXP16104 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
H2AFXP16104 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
H2AFXP16104 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
H2AFXP16104 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
H2AFXP16104 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
H2AFXP16104 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
H2AFXP16104 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC19.49■□□□□ 0.71
H2AFXP16104 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.49■□□□□ 0.71
H2AFXP16104 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
H2AFXP16104 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
H2AFXP16104 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
H2AFXP16104 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
H2AFXP16104 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
H2AFXP16104 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
H2AFXP16104 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.49■□□□□ 0.71
H2AFXP16104 AL162412.1-201ENST00000567129 965 ntBASIC19.49■□□□□ 0.71
H2AFXP16104 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC19.49■□□□□ 0.71
H2AFXP16104 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
H2AFXP16104 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
H2AFXP16104 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
H2AFXP16104 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
H2AFXP16104 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.49■□□□□ 0.71
H2AFXP16104 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
H2AFXP16104 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
H2AFXP16104 AC008556.1-201ENST00000610908 2040 ntBASIC19.49■□□□□ 0.71
H2AFXP16104 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
H2AFXP16104 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
H2AFXP16104 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
H2AFXP16104 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
H2AFXP16104 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
H2AFXP16104 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
H2AFXP16104 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
H2AFXP16104 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
H2AFXP16104 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC19.48■□□□□ 0.71
H2AFXP16104 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC19.48■□□□□ 0.71
H2AFXP16104 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
H2AFXP16104 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
H2AFXP16104 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
H2AFXP16104 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.48■□□□□ 0.71
H2AFXP16104 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
H2AFXP16104 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
H2AFXP16104 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC19.48■□□□□ 0.71
H2AFXP16104 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
H2AFXP16104 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.48■□□□□ 0.71
H2AFXP16104 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.48■□□□□ 0.71
H2AFXP16104 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
H2AFXP16104 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.48■□□□□ 0.71
H2AFXP16104 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.48■□□□□ 0.71
H2AFXP16104 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.48■□□□□ 0.71
H2AFXP16104 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC19.48■□□□□ 0.71
H2AFXP16104 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
H2AFXP16104 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
H2AFXP16104 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
H2AFXP16104 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
H2AFXP16104 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
H2AFXP16104 KRT8P8-201ENST00000434750 1448 ntBASIC19.48■□□□□ 0.71
H2AFXP16104 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.48■□□□□ 0.71
H2AFXP16104 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
H2AFXP16104 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.48■□□□□ 0.71
H2AFXP16104 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC19.48■□□□□ 0.71
H2AFXP16104 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.48■□□□□ 0.71
H2AFXP16104 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
H2AFXP16104 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
H2AFXP16104 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC19.47■□□□□ 0.71
H2AFXP16104 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
H2AFXP16104 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
H2AFXP16104 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
H2AFXP16104 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
H2AFXP16104 RASA4CP-201ENST00000424092 1398 ntBASIC19.47■□□□□ 0.71
H2AFXP16104 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
H2AFXP16104 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms