Protein–RNA interactions for Protein: P0DJJ0

SRGAP2C, SLIT-ROBO Rho GTPase-activating protein 2C, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2CP0DJJ0 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SRGAP2CP0DJJ0 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SRGAP2CP0DJJ0 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SRGAP2CP0DJJ0 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SRGAP2CP0DJJ0 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC20.61■□□□□ 0.89
SRGAP2CP0DJJ0 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC20.61■□□□□ 0.89
SRGAP2CP0DJJ0 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SRGAP2CP0DJJ0 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SRGAP2CP0DJJ0 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC20.61■□□□□ 0.89
SRGAP2CP0DJJ0 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
SRGAP2CP0DJJ0 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SRGAP2CP0DJJ0 STARP1-201ENST00000397973 869 ntBASIC20.61■□□□□ 0.89
SRGAP2CP0DJJ0 GRAMD4P1-201ENST00000435181 1110 ntBASIC20.61■□□□□ 0.89
SRGAP2CP0DJJ0 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC20.61■□□□□ 0.89
SRGAP2CP0DJJ0 AL671277.2-201ENST00000458060 996 ntBASIC20.61■□□□□ 0.89
SRGAP2CP0DJJ0 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC20.61■□□□□ 0.89
SRGAP2CP0DJJ0 AC112497.1-201ENST00000624824 639 ntBASIC20.61■□□□□ 0.89
SRGAP2CP0DJJ0 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC20.61■□□□□ 0.89
SRGAP2CP0DJJ0 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC20.61■□□□□ 0.89
SRGAP2CP0DJJ0 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SRGAP2CP0DJJ0 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SRGAP2CP0DJJ0 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SRGAP2CP0DJJ0 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
SRGAP2CP0DJJ0 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
SRGAP2CP0DJJ0 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SRGAP2CP0DJJ0 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SRGAP2CP0DJJ0 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SRGAP2CP0DJJ0 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SRGAP2CP0DJJ0 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SRGAP2CP0DJJ0 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC20.6■□□□□ 0.89
SRGAP2CP0DJJ0 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.6■□□□□ 0.89
SRGAP2CP0DJJ0 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SRGAP2CP0DJJ0 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SRGAP2CP0DJJ0 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC20.6■□□□□ 0.89
SRGAP2CP0DJJ0 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SRGAP2CP0DJJ0 MIR564-202ENST00000385049 94 ntBASIC20.6■□□□□ 0.89
SRGAP2CP0DJJ0 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SRGAP2CP0DJJ0 SPDYE15P-201ENST00000424157 909 ntBASIC20.6■□□□□ 0.89
SRGAP2CP0DJJ0 ISCU-203ENST00000431221 799 ntTSL 2 BASIC20.6■□□□□ 0.89
SRGAP2CP0DJJ0 AC112907.2-201ENST00000448639 330 ntBASIC20.6■□□□□ 0.89
SRGAP2CP0DJJ0 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC20.6■□□□□ 0.89
SRGAP2CP0DJJ0 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
SRGAP2CP0DJJ0 DFFB-212ENST00000625756 649 ntTSL 5 BASIC20.6■□□□□ 0.89
SRGAP2CP0DJJ0 AL358472.4-201ENST00000633140 710 ntBASIC20.6■□□□□ 0.89
SRGAP2CP0DJJ0 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SRGAP2CP0DJJ0 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC20.6■□□□□ 0.89
SRGAP2CP0DJJ0 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SRGAP2CP0DJJ0 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SRGAP2CP0DJJ0 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC20.6■□□□□ 0.89
SRGAP2CP0DJJ0 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SRGAP2CP0DJJ0 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SRGAP2CP0DJJ0 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC20.6■□□□□ 0.89
SRGAP2CP0DJJ0 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SRGAP2CP0DJJ0 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SRGAP2CP0DJJ0 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SRGAP2CP0DJJ0 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.6■□□□□ 0.89
SRGAP2CP0DJJ0 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
SRGAP2CP0DJJ0 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SRGAP2CP0DJJ0 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SRGAP2CP0DJJ0 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SRGAP2CP0DJJ0 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC20.59■□□□□ 0.89
SRGAP2CP0DJJ0 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SRGAP2CP0DJJ0 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SRGAP2CP0DJJ0 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
SRGAP2CP0DJJ0 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SRGAP2CP0DJJ0 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SRGAP2CP0DJJ0 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SRGAP2CP0DJJ0 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SRGAP2CP0DJJ0 CD320-202ENST00000537716 1119 ntTSL 2 BASIC20.59■□□□□ 0.89
SRGAP2CP0DJJ0 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
SRGAP2CP0DJJ0 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SRGAP2CP0DJJ0 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC20.59■□□□□ 0.89
SRGAP2CP0DJJ0 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC20.59■□□□□ 0.89
SRGAP2CP0DJJ0 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SRGAP2CP0DJJ0 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SRGAP2CP0DJJ0 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SRGAP2CP0DJJ0 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC20.59■□□□□ 0.89
SRGAP2CP0DJJ0 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.59■□□□□ 0.89
SRGAP2CP0DJJ0 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC20.58■□□□□ 0.89
SRGAP2CP0DJJ0 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.58■□□□□ 0.89
SRGAP2CP0DJJ0 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC20.58■□□□□ 0.89
SRGAP2CP0DJJ0 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
SRGAP2CP0DJJ0 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
SRGAP2CP0DJJ0 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC20.58■□□□□ 0.89
SRGAP2CP0DJJ0 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SRGAP2CP0DJJ0 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC20.58■□□□□ 0.89
SRGAP2CP0DJJ0 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SRGAP2CP0DJJ0 KRT18P23-201ENST00000435622 1283 ntBASIC20.58■□□□□ 0.89
SRGAP2CP0DJJ0 ELP6-205ENST00000439305 880 ntTSL 2 BASIC20.58■□□□□ 0.89
SRGAP2CP0DJJ0 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SRGAP2CP0DJJ0 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC20.58■□□□□ 0.89
SRGAP2CP0DJJ0 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC20.58■□□□□ 0.89
SRGAP2CP0DJJ0 AC068587.9-201ENST00000641814 219 ntBASIC20.58■□□□□ 0.89
SRGAP2CP0DJJ0 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SRGAP2CP0DJJ0 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC20.58■□□□□ 0.89
SRGAP2CP0DJJ0 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SRGAP2CP0DJJ0 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SRGAP2CP0DJJ0 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SRGAP2CP0DJJ0 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
SRGAP2CP0DJJ0 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.58■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms