Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RAB40ALP0C0E4 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAB40ALP0C0E4 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAB40ALP0C0E4 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC17.68■□□□□ 0.42
RAB40ALP0C0E4 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAB40ALP0C0E4 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17.67■□□□□ 0.42
RAB40ALP0C0E4 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAB40ALP0C0E4 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RAB40ALP0C0E4 Z82202.1-201ENST00000623446 1880 ntBASIC17.67■□□□□ 0.42
RAB40ALP0C0E4 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAB40ALP0C0E4 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
RAB40ALP0C0E4 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RAB40ALP0C0E4 AC036111.1-201ENST00000533973 1582 ntBASIC17.67■□□□□ 0.42
RAB40ALP0C0E4 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RAB40ALP0C0E4 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAB40ALP0C0E4 HBZP1-201ENST00000354915 429 ntBASIC17.67■□□□□ 0.42
RAB40ALP0C0E4 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RAB40ALP0C0E4 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
RAB40ALP0C0E4 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.67■□□□□ 0.42
RAB40ALP0C0E4 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC17.67■□□□□ 0.42
RAB40ALP0C0E4 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC17.67■□□□□ 0.42
RAB40ALP0C0E4 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAB40ALP0C0E4 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC17.67■□□□□ 0.42
RAB40ALP0C0E4 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC17.67■□□□□ 0.42
RAB40ALP0C0E4 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.67■□□□□ 0.42
RAB40ALP0C0E4 CLN6-214ENST00000636314 442 ntTSL 3 BASIC17.67■□□□□ 0.42
RAB40ALP0C0E4 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RAB40ALP0C0E4 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAB40ALP0C0E4 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAB40ALP0C0E4 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAB40ALP0C0E4 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC17.67■□□□□ 0.42
RAB40ALP0C0E4 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC17.67■□□□□ 0.42
RAB40ALP0C0E4 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC17.67■□□□□ 0.42
RAB40ALP0C0E4 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
RAB40ALP0C0E4 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RAB40ALP0C0E4 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RAB40ALP0C0E4 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAB40ALP0C0E4 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.67■□□□□ 0.42
RAB40ALP0C0E4 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RAB40ALP0C0E4 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB40ALP0C0E4 TREX1-205ENST00000625293 1783 ntBASIC17.66■□□□□ 0.42
RAB40ALP0C0E4 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB40ALP0C0E4 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB40ALP0C0E4 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.66■□□□□ 0.42
RAB40ALP0C0E4 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB40ALP0C0E4 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RAB40ALP0C0E4 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB40ALP0C0E4 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RAB40ALP0C0E4 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC17.66■□□□□ 0.42
RAB40ALP0C0E4 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC17.66■□□□□ 0.42
RAB40ALP0C0E4 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC17.66■□□□□ 0.42
RAB40ALP0C0E4 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.66■□□□□ 0.42
RAB40ALP0C0E4 AC093458.2-201ENST00000623150 629 ntBASIC17.66■□□□□ 0.42
RAB40ALP0C0E4 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB40ALP0C0E4 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC17.66■□□□□ 0.42
RAB40ALP0C0E4 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RAB40ALP0C0E4 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RAB40ALP0C0E4 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB40ALP0C0E4 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB40ALP0C0E4 AC098818.2-201ENST00000564925 2320 ntBASIC17.66■□□□□ 0.42
RAB40ALP0C0E4 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB40ALP0C0E4 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB40ALP0C0E4 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB40ALP0C0E4 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAB40ALP0C0E4 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
RAB40ALP0C0E4 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.65■□□□□ 0.42
RAB40ALP0C0E4 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.65■□□□□ 0.42
RAB40ALP0C0E4 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAB40ALP0C0E4 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RAB40ALP0C0E4 FXN-203ENST00000396366 922 ntTSL 2 BASIC17.65■□□□□ 0.42
RAB40ALP0C0E4 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC17.65■□□□□ 0.42
RAB40ALP0C0E4 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.65■□□□□ 0.42
RAB40ALP0C0E4 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RAB40ALP0C0E4 AC024243.1-201ENST00000609234 778 ntBASIC17.65■□□□□ 0.42
RAB40ALP0C0E4 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC17.65■□□□□ 0.42
RAB40ALP0C0E4 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAB40ALP0C0E4 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAB40ALP0C0E4 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC17.65■□□□□ 0.42
RAB40ALP0C0E4 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAB40ALP0C0E4 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.65■□□□□ 0.42
RAB40ALP0C0E4 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAB40ALP0C0E4 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
RAB40ALP0C0E4 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
RAB40ALP0C0E4 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
RAB40ALP0C0E4 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
RAB40ALP0C0E4 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
RAB40ALP0C0E4 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.64■□□□□ 0.41
RAB40ALP0C0E4 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
RAB40ALP0C0E4 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAB40ALP0C0E4 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RAB40ALP0C0E4 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAB40ALP0C0E4 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RAB40ALP0C0E4 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.64■□□□□ 0.41
RAB40ALP0C0E4 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAB40ALP0C0E4 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
RAB40ALP0C0E4 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.64■□□□□ 0.41
RAB40ALP0C0E4 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAB40ALP0C0E4 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC17.64■□□□□ 0.41
RAB40ALP0C0E4 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC17.64■□□□□ 0.41
RAB40ALP0C0E4 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms