Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLTAP09496 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLTAP09496 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLTAP09496 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC20.49■□□□□ 0.87
CLTAP09496 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CLTAP09496 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLTAP09496 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLTAP09496 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLTAP09496 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLTAP09496 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CLTAP09496 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC20.49■□□□□ 0.87
CLTAP09496 BX664615.1-201ENST00000443558 458 ntBASIC20.49■□□□□ 0.87
CLTAP09496 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC20.49■□□□□ 0.87
CLTAP09496 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CLTAP09496 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC20.49■□□□□ 0.87
CLTAP09496 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC20.49■□□□□ 0.87
CLTAP09496 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CLTAP09496 AL049812.1-201ENST00000432563 2267 ntBASIC20.49■□□□□ 0.87
CLTAP09496 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLTAP09496 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC20.49■□□□□ 0.87
CLTAP09496 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.49■□□□□ 0.87
CLTAP09496 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
CLTAP09496 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLTAP09496 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
CLTAP09496 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC20.49■□□□□ 0.87
CLTAP09496 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC20.49■□□□□ 0.87
CLTAP09496 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC20.48■□□□□ 0.87
CLTAP09496 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
CLTAP09496 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CLTAP09496 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CLTAP09496 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC20.48■□□□□ 0.87
CLTAP09496 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CLTAP09496 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.48■□□□□ 0.87
CLTAP09496 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC20.48■□□□□ 0.87
CLTAP09496 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
CLTAP09496 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CLTAP09496 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CLTAP09496 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CLTAP09496 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CLTAP09496 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC20.48■□□□□ 0.87
CLTAP09496 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CLTAP09496 AC141257.4-201ENST00000634557 245 ntBASIC20.48■□□□□ 0.87
CLTAP09496 AC136944.6-201ENST00000634818 245 ntBASIC20.48■□□□□ 0.87
CLTAP09496 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
CLTAP09496 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CLTAP09496 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CLTAP09496 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
CLTAP09496 AL512353.2-201ENST00000448759 1962 ntBASIC20.48■□□□□ 0.87
CLTAP09496 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CLTAP09496 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CLTAP09496 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CLTAP09496 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CLTAP09496 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
CLTAP09496 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
CLTAP09496 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
CLTAP09496 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLTAP09496 AC004408.2-201ENST00000623613 2777 ntBASIC20.47■□□□□ 0.87
CLTAP09496 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLTAP09496 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLTAP09496 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC20.47■□□□□ 0.87
CLTAP09496 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLTAP09496 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CLTAP09496 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC20.47■□□□□ 0.87
CLTAP09496 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
CLTAP09496 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC20.47■□□□□ 0.87
CLTAP09496 RBM42-202ENST00000586618 771 ntTSL 3 BASIC20.47■□□□□ 0.87
CLTAP09496 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC20.47■□□□□ 0.87
CLTAP09496 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLTAP09496 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLTAP09496 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLTAP09496 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CLTAP09496 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLTAP09496 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLTAP09496 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
CLTAP09496 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLTAP09496 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLTAP09496 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLTAP09496 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLTAP09496 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CLTAP09496 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
CLTAP09496 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC20.46■□□□□ 0.87
CLTAP09496 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CLTAP09496 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.46■□□□□ 0.87
CLTAP09496 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLTAP09496 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLTAP09496 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLTAP09496 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
CLTAP09496 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLTAP09496 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLTAP09496 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CLTAP09496 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLTAP09496 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLTAP09496 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLTAP09496 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC20.46■□□□□ 0.87
CLTAP09496 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
CLTAP09496 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC20.46■□□□□ 0.87
CLTAP09496 MCCD1P1-208ENST00000445732 328 ntBASIC20.46■□□□□ 0.87
CLTAP09496 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLTAP09496 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CLTAP09496 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms