Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CD48P09326 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CD48P09326 PRR31-201ENST00000371629 978 ntTSL 2 BASIC19.45■□□□□ 0.7
CD48P09326 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CD48P09326 CRYGFP-201ENST00000418459 633 ntBASIC19.45■□□□□ 0.7
CD48P09326 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC19.45■□□□□ 0.7
CD48P09326 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CD48P09326 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CD48P09326 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC19.45■□□□□ 0.7
CD48P09326 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC19.45■□□□□ 0.7
CD48P09326 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CD48P09326 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CD48P09326 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.45■□□□□ 0.7
CD48P09326 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
CD48P09326 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CD48P09326 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CD48P09326 AC026471.1-201ENST00000564629 3026 ntBASIC19.45■□□□□ 0.7
CD48P09326 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CD48P09326 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CD48P09326 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
CD48P09326 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.45■□□□□ 0.7
CD48P09326 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC19.45■□□□□ 0.7
CD48P09326 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CD48P09326 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CD48P09326 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CD48P09326 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.44■□□□□ 0.7
CD48P09326 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.44■□□□□ 0.7
CD48P09326 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CD48P09326 AC008556.1-201ENST00000610908 2040 ntBASIC19.44■□□□□ 0.7
CD48P09326 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.44■□□□□ 0.7
CD48P09326 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CD48P09326 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CD48P09326 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CD48P09326 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CD48P09326 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CD48P09326 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CD48P09326 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CD48P09326 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.44■□□□□ 0.7
CD48P09326 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC19.44■□□□□ 0.7
CD48P09326 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC19.44■□□□□ 0.7
CD48P09326 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CD48P09326 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC19.44■□□□□ 0.7
CD48P09326 LETM1P2-201ENST00000597330 2178 ntBASIC19.44■□□□□ 0.7
CD48P09326 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CD48P09326 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
CD48P09326 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CD48P09326 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CD48P09326 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CD48P09326 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CD48P09326 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CD48P09326 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
CD48P09326 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19.43■□□□□ 0.7
CD48P09326 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CD48P09326 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
CD48P09326 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CD48P09326 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CD48P09326 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.43■□□□□ 0.7
CD48P09326 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CD48P09326 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CD48P09326 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CD48P09326 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
CD48P09326 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CD48P09326 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CD48P09326 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CD48P09326 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CD48P09326 RBM17P1-201ENST00000453646 1190 ntBASIC19.43■□□□□ 0.7
CD48P09326 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC19.43■□□□□ 0.7
CD48P09326 SNORA78-201ENST00000459373 127 ntBASIC19.43■□□□□ 0.7
CD48P09326 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CD48P09326 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC19.43■□□□□ 0.7
CD48P09326 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
CD48P09326 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.43■□□□□ 0.7
CD48P09326 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CD48P09326 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CD48P09326 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CD48P09326 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CD48P09326 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CD48P09326 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CD48P09326 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CD48P09326 GPAT2P1-201ENST00000444924 1672 ntBASIC19.43■□□□□ 0.7
CD48P09326 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CD48P09326 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
CD48P09326 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CD48P09326 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CD48P09326 AC079598.2-202ENST00000546624 1451 ntBASIC19.42■□□□□ 0.7
CD48P09326 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.42■□□□□ 0.7
CD48P09326 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CD48P09326 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.42■□□□□ 0.7
CD48P09326 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
CD48P09326 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CD48P09326 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19.42■□□□□ 0.7
CD48P09326 MIR718-201ENST00000390190 70 ntBASIC19.42■□□□□ 0.7
CD48P09326 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CD48P09326 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
CD48P09326 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.42■□□□□ 0.7
CD48P09326 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC19.42■□□□□ 0.7
CD48P09326 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.42■□□□□ 0.7
CD48P09326 COMP-202ENST00000425807 2292 ntTSL 2 BASIC19.42■□□□□ 0.7
CD48P09326 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CD48P09326 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms