Protein–RNA interactions for Protein: P08922

ROS1, Proto-oncogene tyrosine-protein kinase ROS, humanhuman

Predictions only

Length 2,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ROS1P08922 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ROS1P08922 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ROS1P08922 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
ROS1P08922 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.18
ROS1P08922 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
ROS1P08922 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
ROS1P08922 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
ROS1P08922 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.18
ROS1P08922 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
ROS1P08922 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
ROS1P08922 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
ROS1P08922 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
ROS1P08922 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
ROS1P08922 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
ROS1P08922 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC16.14■□□□□ 0.18
ROS1P08922 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC16.14■□□□□ 0.17
ROS1P08922 AC093484.2-201ENST00000580996 2166 ntBASIC16.14■□□□□ 0.17
ROS1P08922 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
ROS1P08922 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ROS1P08922 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ROS1P08922 KRT8P3-201ENST00000519669 1449 ntBASIC16.14■□□□□ 0.17
ROS1P08922 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ROS1P08922 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ROS1P08922 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ROS1P08922 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ROS1P08922 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC16.14■□□□□ 0.17
ROS1P08922 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ROS1P08922 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.14■□□□□ 0.17
ROS1P08922 NPAP1P7-201ENST00000613027 823 ntBASIC16.14■□□□□ 0.17
ROS1P08922 VPS72-207ENST00000640458 689 ntTSL 5 BASIC16.14■□□□□ 0.17
ROS1P08922 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC16.14■□□□□ 0.17
ROS1P08922 AC073130.3-201ENST00000624389 2278 ntBASIC16.14■□□□□ 0.17
ROS1P08922 TEX21P-204ENST00000641479 1693 ntBASIC16.14■□□□□ 0.17
ROS1P08922 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
ROS1P08922 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ROS1P08922 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ROS1P08922 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ROS1P08922 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
ROS1P08922 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC16.14■□□□□ 0.17
ROS1P08922 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
ROS1P08922 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ROS1P08922 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC16.14■□□□□ 0.17
ROS1P08922 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
ROS1P08922 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
ROS1P08922 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ROS1P08922 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
ROS1P08922 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ROS1P08922 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.13■□□□□ 0.17
ROS1P08922 BCL10-202ENST00000620248 774 ntTSL 5 BASIC16.13■□□□□ 0.17
ROS1P08922 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ROS1P08922 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ROS1P08922 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC16.13■□□□□ 0.17
ROS1P08922 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ROS1P08922 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ROS1P08922 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
ROS1P08922 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ROS1P08922 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
ROS1P08922 TPM4P1-201ENST00000436100 807 ntBASIC16.13■□□□□ 0.17
ROS1P08922 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ROS1P08922 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC16.13■□□□□ 0.17
ROS1P08922 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC16.13■□□□□ 0.17
ROS1P08922 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC16.13■□□□□ 0.17
ROS1P08922 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC16.13■□□□□ 0.17
ROS1P08922 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
ROS1P08922 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
ROS1P08922 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC16.13■□□□□ 0.17
ROS1P08922 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC16.13■□□□□ 0.17
ROS1P08922 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC16.13■□□□□ 0.17
ROS1P08922 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC16.12■□□□□ 0.17
ROS1P08922 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ROS1P08922 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ROS1P08922 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC16.12■□□□□ 0.17
ROS1P08922 AL645929.1-201ENST00000420084 975 ntBASIC16.12■□□□□ 0.17
ROS1P08922 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC16.12■□□□□ 0.17
ROS1P08922 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC16.12■□□□□ 0.17
ROS1P08922 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
ROS1P08922 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC16.12■□□□□ 0.17
ROS1P08922 AL157888.1-201ENST00000631930 593 ntBASIC16.12■□□□□ 0.17
ROS1P08922 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
ROS1P08922 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC16.12■□□□□ 0.17
ROS1P08922 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ROS1P08922 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC16.12■□□□□ 0.17
ROS1P08922 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
ROS1P08922 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ROS1P08922 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ROS1P08922 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
ROS1P08922 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
ROS1P08922 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
ROS1P08922 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
ROS1P08922 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ROS1P08922 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC16.12■□□□□ 0.17
ROS1P08922 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC16.12■□□□□ 0.17
ROS1P08922 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ROS1P08922 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ROS1P08922 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
ROS1P08922 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC16.12■□□□□ 0.17
ROS1P08922 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC16.12■□□□□ 0.17
ROS1P08922 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
ROS1P08922 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC16.12■□□□□ 0.17
ROS1P08922 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms