Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
TPM3P06753 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TPM3P06753 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
TPM3P06753 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TPM3P06753 RPS2P52-201ENST00000469610 820 ntBASIC21.03■□□□□ 0.96
TPM3P06753 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
TPM3P06753 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC21.03■□□□□ 0.96
TPM3P06753 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TPM3P06753 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC21.03■□□□□ 0.96
TPM3P06753 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC21.03■□□□□ 0.96
TPM3P06753 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
TPM3P06753 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC21.03■□□□□ 0.96
TPM3P06753 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TPM3P06753 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC21.03■□□□□ 0.96
TPM3P06753 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TPM3P06753 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TPM3P06753 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
TPM3P06753 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TPM3P06753 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TPM3P06753 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TPM3P06753 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TPM3P06753 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
TPM3P06753 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TPM3P06753 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
TPM3P06753 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC21.02■□□□□ 0.96
TPM3P06753 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC21.02■□□□□ 0.96
TPM3P06753 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TPM3P06753 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC21.02■□□□□ 0.96
TPM3P06753 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC21.02■□□□□ 0.96
TPM3P06753 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC21.02■□□□□ 0.96
TPM3P06753 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
TPM3P06753 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TPM3P06753 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TPM3P06753 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TPM3P06753 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TPM3P06753 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TPM3P06753 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
TPM3P06753 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.95
TPM3P06753 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
TPM3P06753 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
TPM3P06753 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
TPM3P06753 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.95
TPM3P06753 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC21.02■□□□□ 0.95
TPM3P06753 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
TPM3P06753 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC21.01■□□□□ 0.95
TPM3P06753 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
TPM3P06753 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
TPM3P06753 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TPM3P06753 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
TPM3P06753 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC21.01■□□□□ 0.95
TPM3P06753 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TPM3P06753 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC21.01■□□□□ 0.95
TPM3P06753 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC21.01■□□□□ 0.95
TPM3P06753 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TPM3P06753 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC21.01■□□□□ 0.95
TPM3P06753 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC21.01■□□□□ 0.95
TPM3P06753 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC21.01■□□□□ 0.95
TPM3P06753 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC21.01■□□□□ 0.95
TPM3P06753 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TPM3P06753 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TPM3P06753 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TPM3P06753 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TPM3P06753 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TPM3P06753 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
TPM3P06753 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TPM3P06753 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC21.01■□□□□ 0.95
TPM3P06753 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TPM3P06753 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TPM3P06753 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TPM3P06753 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
TPM3P06753 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC21■□□□□ 0.95
TPM3P06753 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
TPM3P06753 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
TPM3P06753 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
TPM3P06753 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TPM3P06753 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
TPM3P06753 AC124283.5-201ENST00000624661 1809 ntBASIC21■□□□□ 0.95
TPM3P06753 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC21■□□□□ 0.95
TPM3P06753 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC21■□□□□ 0.95
TPM3P06753 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
TPM3P06753 BX276092.2-201ENST00000417668 665 ntBASIC21■□□□□ 0.95
TPM3P06753 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC21■□□□□ 0.95
TPM3P06753 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC21■□□□□ 0.95
TPM3P06753 PHB2-213ENST00000546111 858 ntTSL 2 BASIC21■□□□□ 0.95
TPM3P06753 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC21■□□□□ 0.95
TPM3P06753 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
TPM3P06753 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
TPM3P06753 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
TPM3P06753 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC21■□□□□ 0.95
TPM3P06753 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
TPM3P06753 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC21■□□□□ 0.95
TPM3P06753 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
TPM3P06753 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
TPM3P06753 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TPM3P06753 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TPM3P06753 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
TPM3P06753 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC21■□□□□ 0.95
TPM3P06753 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TPM3P06753 AC134043.2-201ENST00000624206 2238 ntBASIC21■□□□□ 0.95
TPM3P06753 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms