Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
CHGBP05060 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CHGBP05060 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CHGBP05060 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CHGBP05060 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC22.52■■□□□ 1.2
CHGBP05060 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC22.52■■□□□ 1.2
CHGBP05060 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CHGBP05060 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CHGBP05060 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CHGBP05060 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
CHGBP05060 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC22.52■■□□□ 1.2
CHGBP05060 AK4P3-201ENST00000418260 669 ntBASIC22.52■■□□□ 1.2
CHGBP05060 COX11P1-201ENST00000489116 835 ntBASIC22.52■■□□□ 1.2
CHGBP05060 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC22.52■■□□□ 1.2
CHGBP05060 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC22.52■■□□□ 1.2
CHGBP05060 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC22.52■■□□□ 1.2
CHGBP05060 Z98044.1-201ENST00000632503 1764 ntBASIC22.52■■□□□ 1.2
CHGBP05060 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CHGBP05060 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CHGBP05060 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC22.52■■□□□ 1.2
CHGBP05060 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
CHGBP05060 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC22.52■■□□□ 1.19
CHGBP05060 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC22.52■■□□□ 1.19
CHGBP05060 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
CHGBP05060 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
CHGBP05060 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CHGBP05060 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CHGBP05060 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CHGBP05060 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC22.51■■□□□ 1.19
CHGBP05060 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC22.51■■□□□ 1.19
CHGBP05060 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
CHGBP05060 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
CHGBP05060 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CHGBP05060 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC22.51■■□□□ 1.19
CHGBP05060 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC22.51■■□□□ 1.19
CHGBP05060 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC22.51■■□□□ 1.19
CHGBP05060 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC22.51■■□□□ 1.19
CHGBP05060 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
CHGBP05060 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC22.51■■□□□ 1.19
CHGBP05060 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC22.51■■□□□ 1.19
CHGBP05060 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC22.51■■□□□ 1.19
CHGBP05060 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
CHGBP05060 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CHGBP05060 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
CHGBP05060 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CHGBP05060 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CHGBP05060 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC22.51■■□□□ 1.19
CHGBP05060 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CHGBP05060 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC22.51■■□□□ 1.19
CHGBP05060 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC22.51■■□□□ 1.19
CHGBP05060 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CHGBP05060 COBL-210ENST00000632460 1941 ntTSL 5 BASIC22.51■■□□□ 1.19
CHGBP05060 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CHGBP05060 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC22.5■■□□□ 1.19
CHGBP05060 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CHGBP05060 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
CHGBP05060 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC22.5■■□□□ 1.19
CHGBP05060 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CHGBP05060 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CHGBP05060 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CHGBP05060 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC22.5■■□□□ 1.19
CHGBP05060 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC22.5■■□□□ 1.19
CHGBP05060 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CHGBP05060 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC22.5■■□□□ 1.19
CHGBP05060 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC22.5■■□□□ 1.19
CHGBP05060 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC22.5■■□□□ 1.19
CHGBP05060 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC22.5■■□□□ 1.19
CHGBP05060 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC22.5■■□□□ 1.19
CHGBP05060 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC22.5■■□□□ 1.19
CHGBP05060 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CHGBP05060 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC22.5■■□□□ 1.19
CHGBP05060 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CHGBP05060 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CHGBP05060 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CHGBP05060 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CHGBP05060 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC22.5■■□□□ 1.19
CHGBP05060 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC22.5■■□□□ 1.19
CHGBP05060 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CHGBP05060 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CHGBP05060 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CHGBP05060 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CHGBP05060 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CHGBP05060 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC22.49■■□□□ 1.19
CHGBP05060 AL031598.1-201ENST00000561511 1773 ntBASIC22.49■■□□□ 1.19
CHGBP05060 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC22.49■■□□□ 1.19
CHGBP05060 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CHGBP05060 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC22.49■■□□□ 1.19
CHGBP05060 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CHGBP05060 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CHGBP05060 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
CHGBP05060 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CHGBP05060 SPDYE15P-201ENST00000424157 909 ntBASIC22.49■■□□□ 1.19
CHGBP05060 SEC1P-202ENST00000473944 940 ntBASIC22.49■■□□□ 1.19
CHGBP05060 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC22.49■■□□□ 1.19
CHGBP05060 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC22.49■■□□□ 1.19
CHGBP05060 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CHGBP05060 DFFB-212ENST00000625756 649 ntTSL 5 BASIC22.49■■□□□ 1.19
CHGBP05060 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC22.49■■□□□ 1.19
CHGBP05060 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CHGBP05060 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms