Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
VTNP04004 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
VTNP04004 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
VTNP04004 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC20.55■□□□□ 0.88
VTNP04004 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC20.55■□□□□ 0.88
VTNP04004 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
VTNP04004 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC20.55■□□□□ 0.88
VTNP04004 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
VTNP04004 AC068587.9-201ENST00000641814 219 ntBASIC20.55■□□□□ 0.88
VTNP04004 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
VTNP04004 AL049812.1-201ENST00000432563 2267 ntBASIC20.55■□□□□ 0.88
VTNP04004 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
VTNP04004 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
VTNP04004 HOXB1-202ENST00000577092 1414 ntBASIC20.54■□□□□ 0.88
VTNP04004 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
VTNP04004 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC20.54■□□□□ 0.88
VTNP04004 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
VTNP04004 AC006333.2-201ENST00000607957 2099 ntBASIC20.54■□□□□ 0.88
VTNP04004 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC20.54■□□□□ 0.88
VTNP04004 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VTNP04004 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
VTNP04004 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VTNP04004 HCG4P8-203ENST00000443049 980 ntBASIC20.54■□□□□ 0.88
VTNP04004 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC20.54■□□□□ 0.88
VTNP04004 AC104390.1-201ENST00000555663 520 ntBASIC20.54■□□□□ 0.88
VTNP04004 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC20.54■□□□□ 0.88
VTNP04004 AC010240.3-201ENST00000607688 395 ntBASIC20.54■□□□□ 0.88
VTNP04004 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC20.54■□□□□ 0.88
VTNP04004 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VTNP04004 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VTNP04004 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
VTNP04004 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VTNP04004 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VTNP04004 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC20.54■□□□□ 0.88
VTNP04004 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
VTNP04004 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC20.53■□□□□ 0.88
VTNP04004 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC20.53■□□□□ 0.88
VTNP04004 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
VTNP04004 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC20.53■□□□□ 0.88
VTNP04004 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
VTNP04004 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC20.53■□□□□ 0.88
VTNP04004 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
VTNP04004 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
VTNP04004 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC20.53■□□□□ 0.88
VTNP04004 AL136038.4-201ENST00000603606 1261 ntBASIC20.53■□□□□ 0.88
VTNP04004 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC20.53■□□□□ 0.88
VTNP04004 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC20.53■□□□□ 0.88
VTNP04004 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
VTNP04004 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC20.53■□□□□ 0.88
VTNP04004 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
VTNP04004 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
VTNP04004 AL161938.1-201ENST00000569833 2180 ntBASIC20.53■□□□□ 0.88
VTNP04004 AL391807.1-203ENST00000604392 2365 ntBASIC20.53■□□□□ 0.88
VTNP04004 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
VTNP04004 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC20.53■□□□□ 0.88
VTNP04004 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
VTNP04004 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
VTNP04004 AC034236.2-201ENST00000606662 1610 ntBASIC20.53■□□□□ 0.88
VTNP04004 KRT8P7-201ENST00000533003 1432 ntBASIC20.53■□□□□ 0.88
VTNP04004 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
VTNP04004 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
VTNP04004 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
VTNP04004 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
VTNP04004 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
VTNP04004 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
VTNP04004 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
VTNP04004 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
VTNP04004 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
VTNP04004 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
VTNP04004 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
VTNP04004 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC20.52■□□□□ 0.88
VTNP04004 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
VTNP04004 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC20.52■□□□□ 0.88
VTNP04004 HLA-F-220ENST00000434407 884 ntBASIC20.52■□□□□ 0.88
VTNP04004 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC20.52■□□□□ 0.88
VTNP04004 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC20.52■□□□□ 0.88
VTNP04004 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
VTNP04004 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
VTNP04004 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
VTNP04004 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
VTNP04004 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
VTNP04004 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC20.51■□□□□ 0.87
VTNP04004 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.51■□□□□ 0.87
VTNP04004 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
VTNP04004 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
VTNP04004 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC20.51■□□□□ 0.87
VTNP04004 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
VTNP04004 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
VTNP04004 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC20.51■□□□□ 0.87
VTNP04004 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
VTNP04004 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
VTNP04004 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
VTNP04004 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC20.51■□□□□ 0.87
VTNP04004 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC20.51■□□□□ 0.87
VTNP04004 TOLLIP-AS1-201ENST00000530897 939 ntBASIC20.51■□□□□ 0.87
VTNP04004 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC20.51■□□□□ 0.87
VTNP04004 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC20.51■□□□□ 0.87
VTNP04004 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC20.51■□□□□ 0.87
VTNP04004 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
VTNP04004 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms