Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
MT-ND1P03886 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MT-ND1P03886 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.42
MT-ND1P03886 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
MT-ND1P03886 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
MT-ND1P03886 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
MT-ND1P03886 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.42
MT-ND1P03886 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MT-ND1P03886 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
MT-ND1P03886 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MT-ND1P03886 AC092368.3-202ENST00000574180 1591 ntBASIC17.7■□□□□ 0.42
MT-ND1P03886 AC073592.3-201ENST00000625118 1834 ntBASIC17.7■□□□□ 0.42
MT-ND1P03886 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MT-ND1P03886 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
MT-ND1P03886 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.7■□□□□ 0.42
MT-ND1P03886 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MT-ND1P03886 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MT-ND1P03886 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
MT-ND1P03886 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
MT-ND1P03886 YBX1P10-201ENST00000444752 975 ntBASIC17.7■□□□□ 0.42
MT-ND1P03886 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.7■□□□□ 0.42
MT-ND1P03886 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
MT-ND1P03886 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC17.7■□□□□ 0.42
MT-ND1P03886 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC17.7■□□□□ 0.42
MT-ND1P03886 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
MT-ND1P03886 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC17.7■□□□□ 0.42
MT-ND1P03886 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MT-ND1P03886 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
MT-ND1P03886 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
MT-ND1P03886 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
MT-ND1P03886 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
MT-ND1P03886 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
MT-ND1P03886 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MT-ND1P03886 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MT-ND1P03886 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MT-ND1P03886 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC17.69■□□□□ 0.42
MT-ND1P03886 AC020916.1-201ENST00000587762 1774 ntBASIC17.69■□□□□ 0.42
MT-ND1P03886 AL499627.1-201ENST00000569373 2188 ntBASIC17.69■□□□□ 0.42
MT-ND1P03886 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MT-ND1P03886 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
MT-ND1P03886 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MT-ND1P03886 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC17.69■□□□□ 0.42
MT-ND1P03886 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC17.69■□□□□ 0.42
MT-ND1P03886 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MT-ND1P03886 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MT-ND1P03886 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MT-ND1P03886 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
MT-ND1P03886 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
MT-ND1P03886 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MT-ND1P03886 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
MT-ND1P03886 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
MT-ND1P03886 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
MT-ND1P03886 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.68■□□□□ 0.42
MT-ND1P03886 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
MT-ND1P03886 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
MT-ND1P03886 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
MT-ND1P03886 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
MT-ND1P03886 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
MT-ND1P03886 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
MT-ND1P03886 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
MT-ND1P03886 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
MT-ND1P03886 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
MT-ND1P03886 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
MT-ND1P03886 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
MT-ND1P03886 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
MT-ND1P03886 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
MT-ND1P03886 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
MT-ND1P03886 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
MT-ND1P03886 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC17.68■□□□□ 0.42
MT-ND1P03886 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
MT-ND1P03886 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
MT-ND1P03886 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
MT-ND1P03886 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC17.68■□□□□ 0.42
MT-ND1P03886 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC17.68■□□□□ 0.42
MT-ND1P03886 REXO2-208ENST00000539754 791 ntTSL 2 BASIC17.68■□□□□ 0.42
MT-ND1P03886 TK2-208ENST00000545043 1120 ntTSL 2 BASIC17.68■□□□□ 0.42
MT-ND1P03886 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.68■□□□□ 0.42
MT-ND1P03886 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
MT-ND1P03886 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
MT-ND1P03886 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
MT-ND1P03886 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
MT-ND1P03886 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
MT-ND1P03886 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.67■□□□□ 0.42
MT-ND1P03886 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.67■□□□□ 0.42
MT-ND1P03886 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
MT-ND1P03886 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MT-ND1P03886 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.67■□□□□ 0.42
MT-ND1P03886 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MT-ND1P03886 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MT-ND1P03886 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MT-ND1P03886 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MT-ND1P03886 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MT-ND1P03886 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
MT-ND1P03886 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
MT-ND1P03886 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.67■□□□□ 0.42
MT-ND1P03886 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC17.67■□□□□ 0.42
MT-ND1P03886 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC17.67■□□□□ 0.42
MT-ND1P03886 AC060766.5-201ENST00000590539 871 ntBASIC17.67■□□□□ 0.42
MT-ND1P03886 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
MT-ND1P03886 AL121906.2-201ENST00000621597 723 ntBASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms