Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
HLA-DQA1P01909 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC14.12□□□□□ -0.15
HLA-DQA1P01909 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
HLA-DQA1P01909 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
HLA-DQA1P01909 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC14.12□□□□□ -0.15
HLA-DQA1P01909 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
HLA-DQA1P01909 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
HLA-DQA1P01909 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HLA-DQA1P01909 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
HLA-DQA1P01909 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC14.12□□□□□ -0.15
HLA-DQA1P01909 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
HLA-DQA1P01909 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
HLA-DQA1P01909 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HLA-DQA1P01909 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC14.12□□□□□ -0.15
HLA-DQA1P01909 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC14.12□□□□□ -0.15
HLA-DQA1P01909 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HLA-DQA1P01909 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HLA-DQA1P01909 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
HLA-DQA1P01909 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HLA-DQA1P01909 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HLA-DQA1P01909 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HLA-DQA1P01909 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HLA-DQA1P01909 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HLA-DQA1P01909 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HLA-DQA1P01909 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HLA-DQA1P01909 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC14.11□□□□□ -0.15
HLA-DQA1P01909 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HLA-DQA1P01909 YBX1P1-201ENST00000445822 960 ntBASIC14.11□□□□□ -0.15
HLA-DQA1P01909 AC010141.2-201ENST00000452426 721 ntBASIC14.11□□□□□ -0.15
HLA-DQA1P01909 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC14.11□□□□□ -0.15
HLA-DQA1P01909 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC14.11□□□□□ -0.15
HLA-DQA1P01909 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
HLA-DQA1P01909 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HLA-DQA1P01909 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
HLA-DQA1P01909 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
HLA-DQA1P01909 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HLA-DQA1P01909 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
HLA-DQA1P01909 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HLA-DQA1P01909 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC14.11□□□□□ -0.15
HLA-DQA1P01909 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC14.11□□□□□ -0.15
HLA-DQA1P01909 AC080080.1-201ENST00000625121 2420 ntBASIC14.11□□□□□ -0.15
HLA-DQA1P01909 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
HLA-DQA1P01909 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
HLA-DQA1P01909 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HLA-DQA1P01909 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
HLA-DQA1P01909 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
HLA-DQA1P01909 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HLA-DQA1P01909 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HLA-DQA1P01909 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
HLA-DQA1P01909 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DQA1P01909 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC14.1□□□□□ -0.15
HLA-DQA1P01909 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DQA1P01909 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DQA1P01909 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DQA1P01909 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DQA1P01909 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
HLA-DQA1P01909 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DQA1P01909 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DQA1P01909 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
HLA-DQA1P01909 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DQA1P01909 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
HLA-DQA1P01909 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DQA1P01909 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DQA1P01909 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
HLA-DQA1P01909 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DQA1P01909 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DQA1P01909 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DQA1P01909 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DQA1P01909 CD44-222ENST00000526025 1052 ntTSL 2 BASIC14.1□□□□□ -0.15
HLA-DQA1P01909 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC14.1□□□□□ -0.15
HLA-DQA1P01909 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC14.1□□□□□ -0.15
HLA-DQA1P01909 FGF8-207ENST00000618991 856 ntTSL 3 BASIC14.1□□□□□ -0.15
HLA-DQA1P01909 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DQA1P01909 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
HLA-DQA1P01909 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
HLA-DQA1P01909 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DQA1P01909 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DQA1P01909 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC14.1□□□□□ -0.15
HLA-DQA1P01909 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC14.1□□□□□ -0.15
HLA-DQA1P01909 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DQA1P01909 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC14.1□□□□□ -0.15
HLA-DQA1P01909 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC14.1□□□□□ -0.15
HLA-DQA1P01909 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DQA1P01909 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DQA1P01909 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
HLA-DQA1P01909 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC14.09□□□□□ -0.15
HLA-DQA1P01909 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
HLA-DQA1P01909 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HLA-DQA1P01909 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
HLA-DQA1P01909 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
HLA-DQA1P01909 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC14.09□□□□□ -0.15
HLA-DQA1P01909 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HLA-DQA1P01909 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HLA-DQA1P01909 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HLA-DQA1P01909 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HLA-DQA1P01909 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC14.09□□□□□ -0.15
HLA-DQA1P01909 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
HLA-DQA1P01909 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC14.09□□□□□ -0.15
HLA-DQA1P01909 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HLA-DQA1P01909 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms