Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC17.7■□□□□ 0.42
CLPTM1O96005 PBX1-209ENST00000485769 834 ntTSL 2 BASIC17.7■□□□□ 0.42
CLPTM1O96005 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC17.7■□□□□ 0.42
CLPTM1O96005 RARRES2P4-201ENST00000514074 484 ntBASIC17.7■□□□□ 0.42
CLPTM1O96005 OAS3-207ENST00000551007 998 ntTSL 2 BASIC17.7■□□□□ 0.42
CLPTM1O96005 AL162412.1-201ENST00000567129 965 ntBASIC17.7■□□□□ 0.42
CLPTM1O96005 AC104771.1-201ENST00000603335 964 ntBASIC17.7■□□□□ 0.42
CLPTM1O96005 FAM21FP-204ENST00000608637 956 ntBASIC17.7■□□□□ 0.42
CLPTM1O96005 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLPTM1O96005 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.7■□□□□ 0.42
CLPTM1O96005 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLPTM1O96005 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
CLPTM1O96005 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CLPTM1O96005 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLPTM1O96005 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.7■□□□□ 0.42
CLPTM1O96005 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CLPTM1O96005 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.7■□□□□ 0.42
CLPTM1O96005 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLPTM1O96005 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CLPTM1O96005 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.7■□□□□ 0.42
CLPTM1O96005 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLPTM1O96005 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC17.7■□□□□ 0.42
CLPTM1O96005 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CLPTM1O96005 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLPTM1O96005 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLPTM1O96005 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLPTM1O96005 ANO7L1-203ENST00000602586 1720 ntBASIC17.69■□□□□ 0.42
CLPTM1O96005 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CLPTM1O96005 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC17.69■□□□□ 0.42
CLPTM1O96005 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLPTM1O96005 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
CLPTM1O96005 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLPTM1O96005 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CLPTM1O96005 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLPTM1O96005 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CLPTM1O96005 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.69■□□□□ 0.42
CLPTM1O96005 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLPTM1O96005 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CLPTM1O96005 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLPTM1O96005 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.69■□□□□ 0.42
CLPTM1O96005 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.69■□□□□ 0.42
CLPTM1O96005 AC011270.2-201ENST00000624293 2550 ntBASIC17.69■□□□□ 0.42
CLPTM1O96005 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLPTM1O96005 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLPTM1O96005 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLPTM1O96005 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
CLPTM1O96005 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.69■□□□□ 0.42
CLPTM1O96005 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.69■□□□□ 0.42
CLPTM1O96005 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLPTM1O96005 AC007322.3-201ENST00000426526 701 ntBASIC17.69■□□□□ 0.42
CLPTM1O96005 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC17.69■□□□□ 0.42
CLPTM1O96005 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
CLPTM1O96005 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC17.69■□□□□ 0.42
CLPTM1O96005 OR10C1-204ENST00000622521 1039 ntBASIC17.69■□□□□ 0.42
CLPTM1O96005 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CLPTM1O96005 IRX1P1-201ENST00000438849 1838 ntBASIC17.69■□□□□ 0.42
CLPTM1O96005 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLPTM1O96005 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CLPTM1O96005 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLPTM1O96005 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLPTM1O96005 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.69■□□□□ 0.42
CLPTM1O96005 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLPTM1O96005 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CLPTM1O96005 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
CLPTM1O96005 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLPTM1O96005 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.69■□□□□ 0.42
CLPTM1O96005 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CLPTM1O96005 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLPTM1O96005 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLPTM1O96005 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.68■□□□□ 0.42
CLPTM1O96005 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.68■□□□□ 0.42
CLPTM1O96005 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.68■□□□□ 0.42
CLPTM1O96005 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLPTM1O96005 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.68■□□□□ 0.42
CLPTM1O96005 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CLPTM1O96005 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
CLPTM1O96005 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLPTM1O96005 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC17.68■□□□□ 0.42
CLPTM1O96005 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CLPTM1O96005 CASP6-205ENST00000505486 538 ntTSL 4 BASIC17.68■□□□□ 0.42
CLPTM1O96005 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC17.68■□□□□ 0.42
CLPTM1O96005 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC17.68■□□□□ 0.42
CLPTM1O96005 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC17.68■□□□□ 0.42
CLPTM1O96005 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
CLPTM1O96005 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.68■□□□□ 0.42
CLPTM1O96005 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
CLPTM1O96005 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.68■□□□□ 0.42
CLPTM1O96005 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CLPTM1O96005 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CLPTM1O96005 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CLPTM1O96005 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLPTM1O96005 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
CLPTM1O96005 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLPTM1O96005 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CLPTM1O96005 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLPTM1O96005 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLPTM1O96005 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CLPTM1O96005 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLPTM1O96005 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLPTM1O96005 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms