Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
CLDN1O95832 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLDN1O95832 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLDN1O95832 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC16.73■□□□□ 0.27
CLDN1O95832 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CLDN1O95832 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CLDN1O95832 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLDN1O95832 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLDN1O95832 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLDN1O95832 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLDN1O95832 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLDN1O95832 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLDN1O95832 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC16.73■□□□□ 0.27
CLDN1O95832 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CLDN1O95832 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
CLDN1O95832 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLDN1O95832 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CLDN1O95832 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC16.73■□□□□ 0.27
CLDN1O95832 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC16.73■□□□□ 0.27
CLDN1O95832 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLDN1O95832 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLDN1O95832 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CLDN1O95832 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CLDN1O95832 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC16.73■□□□□ 0.27
CLDN1O95832 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.73■□□□□ 0.27
CLDN1O95832 PMS2P1-201ENST00000431037 1228 ntBASIC16.73■□□□□ 0.27
CLDN1O95832 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CLDN1O95832 LINC00265-3P-201ENST00000447588 903 ntBASIC16.73■□□□□ 0.27
CLDN1O95832 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CLDN1O95832 TPSP2-201ENST00000561760 610 ntBASIC16.73■□□□□ 0.27
CLDN1O95832 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CLDN1O95832 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC16.73■□□□□ 0.27
CLDN1O95832 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CLDN1O95832 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLDN1O95832 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CLDN1O95832 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLDN1O95832 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CLDN1O95832 USP39-204ENST00000409766 2033 ntTSL 2 BASIC16.73■□□□□ 0.27
CLDN1O95832 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC16.73■□□□□ 0.27
CLDN1O95832 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC16.73■□□□□ 0.27
CLDN1O95832 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLDN1O95832 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CLDN1O95832 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLDN1O95832 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
CLDN1O95832 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CLDN1O95832 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.72■□□□□ 0.27
CLDN1O95832 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CLDN1O95832 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLDN1O95832 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLDN1O95832 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.72■□□□□ 0.27
CLDN1O95832 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLDN1O95832 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLDN1O95832 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC16.72■□□□□ 0.27
CLDN1O95832 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLDN1O95832 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
CLDN1O95832 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC16.72■□□□□ 0.27
CLDN1O95832 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLDN1O95832 MIR574-201ENST00000385209 96 ntBASIC16.72■□□□□ 0.27
CLDN1O95832 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
CLDN1O95832 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CLDN1O95832 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC16.72■□□□□ 0.27
CLDN1O95832 PENK-208ENST00000523051 772 ntTSL 5 BASIC16.72■□□□□ 0.27
CLDN1O95832 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC16.72■□□□□ 0.27
CLDN1O95832 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CLDN1O95832 AL121912.1-201ENST00000603683 238 ntBASIC16.72■□□□□ 0.27
CLDN1O95832 AF228730.7-201ENST00000641842 219 ntBASIC16.72■□□□□ 0.27
CLDN1O95832 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC16.72■□□□□ 0.27
CLDN1O95832 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLDN1O95832 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLDN1O95832 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC16.72■□□□□ 0.27
CLDN1O95832 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLDN1O95832 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLDN1O95832 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CLDN1O95832 AL162741.1-201ENST00000565563 1558 ntBASIC16.72■□□□□ 0.27
CLDN1O95832 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC16.72■□□□□ 0.27
CLDN1O95832 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
CLDN1O95832 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
CLDN1O95832 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CLDN1O95832 AC112907.3-201ENST00000577781 2400 ntBASIC16.71■□□□□ 0.27
CLDN1O95832 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
CLDN1O95832 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
CLDN1O95832 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
CLDN1O95832 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
CLDN1O95832 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
CLDN1O95832 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLDN1O95832 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLDN1O95832 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC16.71■□□□□ 0.27
CLDN1O95832 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CLDN1O95832 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLDN1O95832 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC16.71■□□□□ 0.27
CLDN1O95832 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLDN1O95832 ILF2-202ENST00000368681 726 ntTSL 2 BASIC16.71■□□□□ 0.27
CLDN1O95832 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
CLDN1O95832 TSPY12P-201ENST00000421279 868 ntBASIC16.71■□□□□ 0.27
CLDN1O95832 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC16.71■□□□□ 0.27
CLDN1O95832 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC16.71■□□□□ 0.27
CLDN1O95832 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CLDN1O95832 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC16.71■□□□□ 0.27
CLDN1O95832 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC16.71■□□□□ 0.27
CLDN1O95832 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms