Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
OPHN1O60890 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
OPHN1O60890 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
OPHN1O60890 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
OPHN1O60890 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.56■□□□□ 0.72
OPHN1O60890 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC19.56■□□□□ 0.72
OPHN1O60890 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC19.56■□□□□ 0.72
OPHN1O60890 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC19.56■□□□□ 0.72
OPHN1O60890 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC19.56■□□□□ 0.72
OPHN1O60890 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC19.56■□□□□ 0.72
OPHN1O60890 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.56■□□□□ 0.72
OPHN1O60890 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19.56■□□□□ 0.72
OPHN1O60890 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.56■□□□□ 0.72
OPHN1O60890 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
OPHN1O60890 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
OPHN1O60890 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
OPHN1O60890 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC19.56■□□□□ 0.72
OPHN1O60890 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
OPHN1O60890 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.56■□□□□ 0.72
OPHN1O60890 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.56■□□□□ 0.72
OPHN1O60890 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
OPHN1O60890 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
OPHN1O60890 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
OPHN1O60890 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
OPHN1O60890 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
OPHN1O60890 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
OPHN1O60890 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
OPHN1O60890 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.55■□□□□ 0.72
OPHN1O60890 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
OPHN1O60890 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.55■□□□□ 0.72
OPHN1O60890 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
OPHN1O60890 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
OPHN1O60890 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
OPHN1O60890 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
OPHN1O60890 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
OPHN1O60890 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
OPHN1O60890 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.55■□□□□ 0.72
OPHN1O60890 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
OPHN1O60890 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
OPHN1O60890 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
OPHN1O60890 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC19.55■□□□□ 0.72
OPHN1O60890 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.55■□□□□ 0.72
OPHN1O60890 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
OPHN1O60890 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
OPHN1O60890 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
OPHN1O60890 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
OPHN1O60890 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
OPHN1O60890 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
OPHN1O60890 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
OPHN1O60890 CROCCP3-202ENST00000420820 1947 ntBASIC19.55■□□□□ 0.72
OPHN1O60890 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.54■□□□□ 0.72
OPHN1O60890 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
OPHN1O60890 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
OPHN1O60890 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
OPHN1O60890 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
OPHN1O60890 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
OPHN1O60890 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
OPHN1O60890 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
OPHN1O60890 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.54■□□□□ 0.72
OPHN1O60890 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
OPHN1O60890 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
OPHN1O60890 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
OPHN1O60890 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC19.54■□□□□ 0.72
OPHN1O60890 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
OPHN1O60890 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.54■□□□□ 0.72
OPHN1O60890 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.54■□□□□ 0.72
OPHN1O60890 GRAMD4P8-201ENST00000605465 1115 ntBASIC19.54■□□□□ 0.72
OPHN1O60890 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.54■□□□□ 0.72
OPHN1O60890 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
OPHN1O60890 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.54■□□□□ 0.72
OPHN1O60890 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.54■□□□□ 0.72
OPHN1O60890 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
OPHN1O60890 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.54■□□□□ 0.72
OPHN1O60890 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.54■□□□□ 0.72
OPHN1O60890 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
OPHN1O60890 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
OPHN1O60890 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
OPHN1O60890 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
OPHN1O60890 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
OPHN1O60890 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
OPHN1O60890 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
OPHN1O60890 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
OPHN1O60890 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
OPHN1O60890 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
OPHN1O60890 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.53■□□□□ 0.72
OPHN1O60890 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
OPHN1O60890 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
OPHN1O60890 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
OPHN1O60890 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
OPHN1O60890 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
OPHN1O60890 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
OPHN1O60890 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
OPHN1O60890 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC19.53■□□□□ 0.72
OPHN1O60890 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC19.53■□□□□ 0.72
OPHN1O60890 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC19.53■□□□□ 0.72
OPHN1O60890 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
OPHN1O60890 C2orf69P3-201ENST00000565542 1120 ntBASIC19.53■□□□□ 0.72
OPHN1O60890 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
OPHN1O60890 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
OPHN1O60890 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms