Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
ZIC3O60481 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC16.88■□□□□ 0.29
ZIC3O60481 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC16.88■□□□□ 0.29
ZIC3O60481 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC16.88■□□□□ 0.29
ZIC3O60481 NME3-204ENST00000563498 920 ntTSL 2 BASIC16.88■□□□□ 0.29
ZIC3O60481 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
ZIC3O60481 AL590326.2-201ENST00000625139 305 ntBASIC16.88■□□□□ 0.29
ZIC3O60481 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC16.88■□□□□ 0.29
ZIC3O60481 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
ZIC3O60481 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ZIC3O60481 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC16.88■□□□□ 0.29
ZIC3O60481 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC16.88■□□□□ 0.29
ZIC3O60481 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.88■□□□□ 0.29
ZIC3O60481 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC16.88■□□□□ 0.29
ZIC3O60481 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ZIC3O60481 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC16.87■□□□□ 0.29
ZIC3O60481 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC16.87■□□□□ 0.29
ZIC3O60481 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
ZIC3O60481 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC16.87■□□□□ 0.29
ZIC3O60481 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ZIC3O60481 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ZIC3O60481 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ZIC3O60481 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
ZIC3O60481 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC16.87■□□□□ 0.29
ZIC3O60481 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
ZIC3O60481 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
ZIC3O60481 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC16.87■□□□□ 0.29
ZIC3O60481 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
ZIC3O60481 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ZIC3O60481 GUK1-204ENST00000366721 689 ntTSL 3 BASIC16.87■□□□□ 0.29
ZIC3O60481 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ZIC3O60481 FAM8A6P-201ENST00000407496 1135 ntBASIC16.87■□□□□ 0.29
ZIC3O60481 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ZIC3O60481 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ZIC3O60481 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
ZIC3O60481 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
ZIC3O60481 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ZIC3O60481 GRAMD4P1-201ENST00000435181 1110 ntBASIC16.87■□□□□ 0.29
ZIC3O60481 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ZIC3O60481 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ZIC3O60481 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ZIC3O60481 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ZIC3O60481 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ZIC3O60481 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC16.87■□□□□ 0.29
ZIC3O60481 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ZIC3O60481 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC16.87■□□□□ 0.29
ZIC3O60481 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC16.87■□□□□ 0.29
ZIC3O60481 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC16.87■□□□□ 0.29
ZIC3O60481 AC024243.1-201ENST00000609234 778 ntBASIC16.87■□□□□ 0.29
ZIC3O60481 AC112497.1-201ENST00000624824 639 ntBASIC16.87■□□□□ 0.29
ZIC3O60481 AC034236.2-201ENST00000606662 1610 ntBASIC16.87■□□□□ 0.29
ZIC3O60481 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC16.87■□□□□ 0.29
ZIC3O60481 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
ZIC3O60481 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ZIC3O60481 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC16.87■□□□□ 0.29
ZIC3O60481 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ZIC3O60481 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
ZIC3O60481 Z98044.1-201ENST00000632503 1764 ntBASIC16.87■□□□□ 0.29
ZIC3O60481 KRT8P7-201ENST00000533003 1432 ntBASIC16.87■□□□□ 0.29
ZIC3O60481 HOXB1-202ENST00000577092 1414 ntBASIC16.87■□□□□ 0.29
ZIC3O60481 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ZIC3O60481 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ZIC3O60481 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC16.86■□□□□ 0.29
ZIC3O60481 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ZIC3O60481 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC16.86■□□□□ 0.29
ZIC3O60481 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ZIC3O60481 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
ZIC3O60481 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ZIC3O60481 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ZIC3O60481 STX6-204ENST00000542060 4809 ntTSL 2 BASIC16.86■□□□□ 0.29
ZIC3O60481 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ZIC3O60481 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ZIC3O60481 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ZIC3O60481 SNAI3-AS1-205ENST00000568633 2096 ntBASIC16.86■□□□□ 0.29
ZIC3O60481 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC16.86■□□□□ 0.29
ZIC3O60481 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ZIC3O60481 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ZIC3O60481 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ZIC3O60481 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
ZIC3O60481 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ZIC3O60481 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ZIC3O60481 KRT18P23-201ENST00000435622 1283 ntBASIC16.86■□□□□ 0.29
ZIC3O60481 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC16.86■□□□□ 0.29
ZIC3O60481 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC16.86■□□□□ 0.29
ZIC3O60481 AC022616.7-201ENST00000525383 220 ntBASIC16.86■□□□□ 0.29
ZIC3O60481 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC16.86■□□□□ 0.29
ZIC3O60481 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ZIC3O60481 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC16.86■□□□□ 0.29
ZIC3O60481 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ZIC3O60481 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC16.86■□□□□ 0.29
ZIC3O60481 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ZIC3O60481 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC16.86■□□□□ 0.29
ZIC3O60481 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC16.86■□□□□ 0.29
ZIC3O60481 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ZIC3O60481 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ZIC3O60481 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC16.86■□□□□ 0.29
ZIC3O60481 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC16.85■□□□□ 0.29
ZIC3O60481 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
ZIC3O60481 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
ZIC3O60481 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms