Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.92■□□□□ 0.46
LCMT2O60294 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
LCMT2O60294 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LCMT2O60294 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.92■□□□□ 0.46
LCMT2O60294 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LCMT2O60294 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
LCMT2O60294 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.92■□□□□ 0.46
LCMT2O60294 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LCMT2O60294 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
LCMT2O60294 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LCMT2O60294 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC17.92■□□□□ 0.46
LCMT2O60294 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LCMT2O60294 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LCMT2O60294 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
LCMT2O60294 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.91■□□□□ 0.46
LCMT2O60294 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LCMT2O60294 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LCMT2O60294 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.91■□□□□ 0.46
LCMT2O60294 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LCMT2O60294 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.91■□□□□ 0.46
LCMT2O60294 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LCMT2O60294 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LCMT2O60294 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.91■□□□□ 0.46
LCMT2O60294 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC17.91■□□□□ 0.46
LCMT2O60294 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.91■□□□□ 0.46
LCMT2O60294 SLC25A3P1-201ENST00000443844 931 ntBASIC17.91■□□□□ 0.46
LCMT2O60294 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.91■□□□□ 0.46
LCMT2O60294 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC17.91■□□□□ 0.46
LCMT2O60294 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LCMT2O60294 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC17.91■□□□□ 0.46
LCMT2O60294 LINC01023-201ENST00000606054 436 ntBASIC17.91■□□□□ 0.46
LCMT2O60294 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.91■□□□□ 0.46
LCMT2O60294 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
LCMT2O60294 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
LCMT2O60294 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
LCMT2O60294 AC036111.1-201ENST00000533973 1582 ntBASIC17.91■□□□□ 0.46
LCMT2O60294 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.91■□□□□ 0.46
LCMT2O60294 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LCMT2O60294 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.9■□□□□ 0.46
LCMT2O60294 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.9■□□□□ 0.46
LCMT2O60294 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LCMT2O60294 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
LCMT2O60294 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LCMT2O60294 AIRN-201ENST00000601203 4374 ntBASIC17.9■□□□□ 0.46
LCMT2O60294 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LCMT2O60294 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.9■□□□□ 0.46
LCMT2O60294 ANO7L1-203ENST00000602586 1720 ntBASIC17.9■□□□□ 0.46
LCMT2O60294 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC17.9■□□□□ 0.46
LCMT2O60294 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LCMT2O60294 Z98044.1-201ENST00000632503 1764 ntBASIC17.9■□□□□ 0.46
LCMT2O60294 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
LCMT2O60294 MIR564-202ENST00000385049 94 ntBASIC17.9■□□□□ 0.46
LCMT2O60294 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC17.9■□□□□ 0.46
LCMT2O60294 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.9■□□□□ 0.46
LCMT2O60294 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC17.9■□□□□ 0.46
LCMT2O60294 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC17.9■□□□□ 0.46
LCMT2O60294 MIR3180-5-201ENST00000583743 153 ntBASIC17.9■□□□□ 0.46
LCMT2O60294 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LCMT2O60294 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LCMT2O60294 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LCMT2O60294 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LCMT2O60294 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
LCMT2O60294 AL499627.1-201ENST00000569373 2188 ntBASIC17.9■□□□□ 0.46
LCMT2O60294 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.9■□□□□ 0.46
LCMT2O60294 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LCMT2O60294 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LCMT2O60294 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.46
LCMT2O60294 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
LCMT2O60294 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.89■□□□□ 0.46
LCMT2O60294 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
LCMT2O60294 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
LCMT2O60294 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC17.89■□□□□ 0.46
LCMT2O60294 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LCMT2O60294 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
LCMT2O60294 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LCMT2O60294 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
LCMT2O60294 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.89■□□□□ 0.45
LCMT2O60294 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC17.89■□□□□ 0.45
LCMT2O60294 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LCMT2O60294 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LCMT2O60294 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LCMT2O60294 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
LCMT2O60294 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LCMT2O60294 AC010203.1-204ENST00000548782 407 ntBASIC17.89■□□□□ 0.45
LCMT2O60294 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
LCMT2O60294 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LCMT2O60294 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.89■□□□□ 0.45
LCMT2O60294 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
LCMT2O60294 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC17.89■□□□□ 0.45
LCMT2O60294 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LCMT2O60294 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LCMT2O60294 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LCMT2O60294 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
LCMT2O60294 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
LCMT2O60294 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LCMT2O60294 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LCMT2O60294 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LCMT2O60294 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LCMT2O60294 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LCMT2O60294 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms