Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
KDELR3O43731 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
KDELR3O43731 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
KDELR3O43731 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
KDELR3O43731 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
KDELR3O43731 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
KDELR3O43731 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.02■□□□□ 0.64
KDELR3O43731 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC19.02■□□□□ 0.64
KDELR3O43731 KRT8P7-201ENST00000533003 1432 ntBASIC19.02■□□□□ 0.64
KDELR3O43731 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
KDELR3O43731 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
KDELR3O43731 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC19.02■□□□□ 0.64
KDELR3O43731 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC19.02■□□□□ 0.64
KDELR3O43731 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC19.02■□□□□ 0.64
KDELR3O43731 AC011558.1-201ENST00000623459 338 ntBASIC19.02■□□□□ 0.64
KDELR3O43731 AL023973.1-201ENST00000624619 620 ntBASIC19.02■□□□□ 0.64
KDELR3O43731 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
KDELR3O43731 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
KDELR3O43731 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.02■□□□□ 0.63
KDELR3O43731 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
KDELR3O43731 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
KDELR3O43731 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
KDELR3O43731 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.01■□□□□ 0.63
KDELR3O43731 HOXB1-202ENST00000577092 1414 ntBASIC19.01■□□□□ 0.63
KDELR3O43731 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
KDELR3O43731 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
KDELR3O43731 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
KDELR3O43731 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.01■□□□□ 0.63
KDELR3O43731 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
KDELR3O43731 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
KDELR3O43731 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC19.01■□□□□ 0.63
KDELR3O43731 ANKRD20A18P-201ENST00000359341 492 ntBASIC19.01■□□□□ 0.63
KDELR3O43731 AK4P3-201ENST00000418260 669 ntBASIC19.01■□□□□ 0.63
KDELR3O43731 GRAMD4P1-201ENST00000435181 1110 ntBASIC19.01■□□□□ 0.63
KDELR3O43731 KRT18P23-201ENST00000435622 1283 ntBASIC19.01■□□□□ 0.63
KDELR3O43731 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC19.01■□□□□ 0.63
KDELR3O43731 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC19.01■□□□□ 0.63
KDELR3O43731 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC19.01■□□□□ 0.63
KDELR3O43731 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC19.01■□□□□ 0.63
KDELR3O43731 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
KDELR3O43731 AC112497.1-201ENST00000624824 639 ntBASIC19.01■□□□□ 0.63
KDELR3O43731 AIRN-201ENST00000601203 4374 ntBASIC19.01■□□□□ 0.63
KDELR3O43731 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
KDELR3O43731 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
KDELR3O43731 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.01■□□□□ 0.63
KDELR3O43731 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
KDELR3O43731 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
KDELR3O43731 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
KDELR3O43731 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.01■□□□□ 0.63
KDELR3O43731 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
KDELR3O43731 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
KDELR3O43731 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
KDELR3O43731 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
KDELR3O43731 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
KDELR3O43731 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC19■□□□□ 0.63
KDELR3O43731 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
KDELR3O43731 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
KDELR3O43731 CROCCP3-202ENST00000420820 1947 ntBASIC19■□□□□ 0.63
KDELR3O43731 AC098818.2-201ENST00000564925 2320 ntBASIC19■□□□□ 0.63
KDELR3O43731 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
KDELR3O43731 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC19■□□□□ 0.63
KDELR3O43731 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
KDELR3O43731 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
KDELR3O43731 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
KDELR3O43731 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
KDELR3O43731 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC19■□□□□ 0.63
KDELR3O43731 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC19■□□□□ 0.63
KDELR3O43731 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
KDELR3O43731 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
KDELR3O43731 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
KDELR3O43731 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
KDELR3O43731 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC19■□□□□ 0.63
KDELR3O43731 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC19■□□□□ 0.63
KDELR3O43731 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC19■□□□□ 0.63
KDELR3O43731 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19■□□□□ 0.63
KDELR3O43731 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC19■□□□□ 0.63
KDELR3O43731 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC19■□□□□ 0.63
KDELR3O43731 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC19■□□□□ 0.63
KDELR3O43731 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
KDELR3O43731 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
KDELR3O43731 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
KDELR3O43731 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
KDELR3O43731 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
KDELR3O43731 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19■□□□□ 0.63
KDELR3O43731 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
KDELR3O43731 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
KDELR3O43731 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
KDELR3O43731 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC19■□□□□ 0.63
KDELR3O43731 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
KDELR3O43731 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
KDELR3O43731 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
KDELR3O43731 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.99■□□□□ 0.63
KDELR3O43731 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
KDELR3O43731 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
KDELR3O43731 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
KDELR3O43731 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
KDELR3O43731 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
KDELR3O43731 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
KDELR3O43731 RNF152P1-201ENST00000397754 604 ntBASIC18.99■□□□□ 0.63
KDELR3O43731 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms