Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 SRI-203ENST00000419179 1307 ntTSL 2 BASIC21.05■□□□□ 0.96
ACTN4O43707 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC21.05■□□□□ 0.96
ACTN4O43707 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
ACTN4O43707 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
ACTN4O43707 RCC2P3-201ENST00000418112 1537 ntBASIC21.05■□□□□ 0.96
ACTN4O43707 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC21.05■□□□□ 0.96
ACTN4O43707 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ACTN4O43707 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ACTN4O43707 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ACTN4O43707 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
ACTN4O43707 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ACTN4O43707 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ACTN4O43707 PEX7-202ENST00000367756 680 ntTSL 3 BASIC21.05■□□□□ 0.96
ACTN4O43707 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC21.05■□□□□ 0.96
ACTN4O43707 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
ACTN4O43707 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC21.05■□□□□ 0.96
ACTN4O43707 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC21.05■□□□□ 0.96
ACTN4O43707 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC21.05■□□□□ 0.96
ACTN4O43707 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC21.05■□□□□ 0.96
ACTN4O43707 GRAP-204ENST00000573099 846 ntTSL 3 BASIC21.05■□□□□ 0.96
ACTN4O43707 AP000692.2-201ENST00000608391 879 ntBASIC21.05■□□□□ 0.96
ACTN4O43707 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
ACTN4O43707 AC079598.2-202ENST00000546624 1451 ntBASIC21.05■□□□□ 0.96
ACTN4O43707 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
ACTN4O43707 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC21.05■□□□□ 0.96
ACTN4O43707 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ACTN4O43707 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
ACTN4O43707 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ACTN4O43707 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ACTN4O43707 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
ACTN4O43707 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
ACTN4O43707 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ACTN4O43707 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC21.04■□□□□ 0.96
ACTN4O43707 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ACTN4O43707 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ACTN4O43707 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
ACTN4O43707 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
ACTN4O43707 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ACTN4O43707 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC21.04■□□□□ 0.96
ACTN4O43707 CD177P1-201ENST00000606252 935 ntBASIC21.04■□□□□ 0.96
ACTN4O43707 AC008622.2-201ENST00000617006 1229 ntBASIC21.04■□□□□ 0.96
ACTN4O43707 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ACTN4O43707 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC21.04■□□□□ 0.96
ACTN4O43707 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
ACTN4O43707 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ACTN4O43707 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ACTN4O43707 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ACTN4O43707 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
ACTN4O43707 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
ACTN4O43707 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
ACTN4O43707 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC21.04■□□□□ 0.96
ACTN4O43707 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC21.04■□□□□ 0.96
ACTN4O43707 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC21.04■□□□□ 0.96
ACTN4O43707 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ACTN4O43707 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ACTN4O43707 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ACTN4O43707 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ACTN4O43707 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
ACTN4O43707 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
ACTN4O43707 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC21.03■□□□□ 0.96
ACTN4O43707 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ACTN4O43707 FSCN1P1-201ENST00000568912 1481 ntBASIC21.03■□□□□ 0.96
ACTN4O43707 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
ACTN4O43707 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ACTN4O43707 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
ACTN4O43707 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC21.03■□□□□ 0.96
ACTN4O43707 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ACTN4O43707 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC21.03■□□□□ 0.96
ACTN4O43707 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC21.03■□□□□ 0.96
ACTN4O43707 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
ACTN4O43707 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
ACTN4O43707 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ACTN4O43707 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
ACTN4O43707 TBC1D3P2-202ENST00000577902 1649 ntBASIC21.03■□□□□ 0.96
ACTN4O43707 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC21.03■□□□□ 0.96
ACTN4O43707 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ACTN4O43707 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ACTN4O43707 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
ACTN4O43707 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
ACTN4O43707 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ACTN4O43707 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
ACTN4O43707 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
ACTN4O43707 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
ACTN4O43707 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC21.02■□□□□ 0.96
ACTN4O43707 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC21.02■□□□□ 0.96
ACTN4O43707 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
ACTN4O43707 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ACTN4O43707 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
ACTN4O43707 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC21.02■□□□□ 0.96
ACTN4O43707 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ACTN4O43707 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ACTN4O43707 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ACTN4O43707 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ACTN4O43707 GCSHP5-201ENST00000443090 522 ntBASIC21.02■□□□□ 0.96
ACTN4O43707 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC21.02■□□□□ 0.96
ACTN4O43707 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC21.02■□□□□ 0.96
ACTN4O43707 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
ACTN4O43707 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ACTN4O43707 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ACTN4O43707 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms