Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC19.52■□□□□ 0.72
CCDC188H7C350 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC188H7C350 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC188H7C350 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC188H7C350 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.72
CCDC188H7C350 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC19.52■□□□□ 0.72
CCDC188H7C350 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC188H7C350 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19.52■□□□□ 0.72
CCDC188H7C350 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.52■□□□□ 0.72
CCDC188H7C350 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC188H7C350 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC188H7C350 PPP1R14BP2-201ENST00000426284 444 ntBASIC19.52■□□□□ 0.72
CCDC188H7C350 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.52■□□□□ 0.72
CCDC188H7C350 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC188H7C350 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC19.52■□□□□ 0.72
CCDC188H7C350 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC188H7C350 KLF2-202ENST00000592003 564 ntTSL 3 BASIC19.52■□□□□ 0.72
CCDC188H7C350 AC092437.1-201ENST00000624794 1048 ntBASIC19.52■□□□□ 0.72
CCDC188H7C350 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19.52■□□□□ 0.72
CCDC188H7C350 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
CCDC188H7C350 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC188H7C350 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC19.52■□□□□ 0.71
CCDC188H7C350 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CCDC188H7C350 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
CCDC188H7C350 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
CCDC188H7C350 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
CCDC188H7C350 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC188H7C350 KRT8P45-201ENST00000414328 1447 ntBASIC19.51■□□□□ 0.71
CCDC188H7C350 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC188H7C350 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
CCDC188H7C350 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC188H7C350 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC19.51■□□□□ 0.71
CCDC188H7C350 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC188H7C350 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.51■□□□□ 0.71
CCDC188H7C350 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC188H7C350 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC188H7C350 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC188H7C350 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC188H7C350 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC19.51■□□□□ 0.71
CCDC188H7C350 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC188H7C350 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC188H7C350 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
CCDC188H7C350 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC188H7C350 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.51■□□□□ 0.71
CCDC188H7C350 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC188H7C350 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
CCDC188H7C350 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC19.51■□□□□ 0.71
CCDC188H7C350 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
CCDC188H7C350 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC188H7C350 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC19.51■□□□□ 0.71
CCDC188H7C350 SOX15-203ENST00000570788 1093 ntBASIC19.51■□□□□ 0.71
CCDC188H7C350 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC19.51■□□□□ 0.71
CCDC188H7C350 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.51■□□□□ 0.71
CCDC188H7C350 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC188H7C350 KRT8P32-201ENST00000512863 1461 ntBASIC19.51■□□□□ 0.71
CCDC188H7C350 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.51■□□□□ 0.71
CCDC188H7C350 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC188H7C350 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
CCDC188H7C350 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC188H7C350 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
CCDC188H7C350 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC188H7C350 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
CCDC188H7C350 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
CCDC188H7C350 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC188H7C350 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC19.5■□□□□ 0.71
CCDC188H7C350 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC188H7C350 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC188H7C350 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC188H7C350 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC188H7C350 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC188H7C350 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC188H7C350 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC188H7C350 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC188H7C350 SLC29A4P1-201ENST00000398760 971 ntBASIC19.5■□□□□ 0.71
CCDC188H7C350 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC19.5■□□□□ 0.71
CCDC188H7C350 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.5■□□□□ 0.71
CCDC188H7C350 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.5■□□□□ 0.71
CCDC188H7C350 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC188H7C350 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC19.5■□□□□ 0.71
CCDC188H7C350 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC19.5■□□□□ 0.71
CCDC188H7C350 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC188H7C350 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC188H7C350 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC188H7C350 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.5■□□□□ 0.71
CCDC188H7C350 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC19.5■□□□□ 0.71
CCDC188H7C350 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC19.5■□□□□ 0.71
CCDC188H7C350 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
CCDC188H7C350 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
CCDC188H7C350 AC093677.2-201ENST00000600169 1863 ntBASIC19.5■□□□□ 0.71
CCDC188H7C350 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.5■□□□□ 0.71
CCDC188H7C350 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
CCDC188H7C350 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC188H7C350 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC188H7C350 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC188H7C350 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC19.49■□□□□ 0.71
CCDC188H7C350 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC19.49■□□□□ 0.71
CCDC188H7C350 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC188H7C350 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC188H7C350 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC19.49■□□□□ 0.71
CCDC188H7C350 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms