Protein–RNA interactions for Protein: A6NHP3

SPDYE2B, Speedy protein E2B, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE2BA6NHP3 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SPDYE2BA6NHP3 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SPDYE2BA6NHP3 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SPDYE2BA6NHP3 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SPDYE2BA6NHP3 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SPDYE2BA6NHP3 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SPDYE2BA6NHP3 AC233702.3-201ENST00000578656 1387 ntBASIC22.25■■□□□ 1.15
SPDYE2BA6NHP3 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC22.25■■□□□ 1.15
SPDYE2BA6NHP3 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
SPDYE2BA6NHP3 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC22.25■■□□□ 1.15
SPDYE2BA6NHP3 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
SPDYE2BA6NHP3 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC22.25■■□□□ 1.15
SPDYE2BA6NHP3 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SPDYE2BA6NHP3 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SPDYE2BA6NHP3 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC22.25■■□□□ 1.15
SPDYE2BA6NHP3 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SPDYE2BA6NHP3 IRX1P1-201ENST00000438849 1838 ntBASIC22.25■■□□□ 1.15
SPDYE2BA6NHP3 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC22.25■■□□□ 1.15
SPDYE2BA6NHP3 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC22.25■■□□□ 1.15
SPDYE2BA6NHP3 EFS-203ENST00000429593 2610 ntTSL 2 BASIC22.25■■□□□ 1.15
SPDYE2BA6NHP3 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC22.25■■□□□ 1.15
SPDYE2BA6NHP3 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC22.25■■□□□ 1.15
SPDYE2BA6NHP3 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
SPDYE2BA6NHP3 AC074051.2-201ENST00000565115 352 ntBASIC22.25■■□□□ 1.15
SPDYE2BA6NHP3 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC22.25■■□□□ 1.15
SPDYE2BA6NHP3 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SPDYE2BA6NHP3 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
SPDYE2BA6NHP3 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
SPDYE2BA6NHP3 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
SPDYE2BA6NHP3 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
SPDYE2BA6NHP3 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC22.24■■□□□ 1.15
SPDYE2BA6NHP3 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SPDYE2BA6NHP3 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
SPDYE2BA6NHP3 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC22.24■■□□□ 1.15
SPDYE2BA6NHP3 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC22.24■■□□□ 1.15
SPDYE2BA6NHP3 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC22.24■■□□□ 1.15
SPDYE2BA6NHP3 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC22.24■■□□□ 1.15
SPDYE2BA6NHP3 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC22.24■■□□□ 1.15
SPDYE2BA6NHP3 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SPDYE2BA6NHP3 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SPDYE2BA6NHP3 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC22.24■■□□□ 1.15
SPDYE2BA6NHP3 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC22.24■■□□□ 1.15
SPDYE2BA6NHP3 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC22.24■■□□□ 1.15
SPDYE2BA6NHP3 NAT14-202ENST00000587400 416 ntTSL 5 BASIC22.24■■□□□ 1.15
SPDYE2BA6NHP3 LINC01711-201ENST00000598340 967 ntBASIC22.24■■□□□ 1.15
SPDYE2BA6NHP3 GPR32P1-201ENST00000601788 811 ntBASIC22.24■■□□□ 1.15
SPDYE2BA6NHP3 AC138894.3-201ENST00000603787 634 ntBASIC22.24■■□□□ 1.15
SPDYE2BA6NHP3 GXYLT1P4-201ENST00000613576 1192 ntBASIC22.24■■□□□ 1.15
SPDYE2BA6NHP3 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC22.24■■□□□ 1.15
SPDYE2BA6NHP3 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SPDYE2BA6NHP3 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SPDYE2BA6NHP3 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
SPDYE2BA6NHP3 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC22.24■■□□□ 1.15
SPDYE2BA6NHP3 UBQLN4P1-201ENST00000461599 1801 ntBASIC22.24■■□□□ 1.15
SPDYE2BA6NHP3 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC22.24■■□□□ 1.15
SPDYE2BA6NHP3 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC22.24■■□□□ 1.15
SPDYE2BA6NHP3 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
SPDYE2BA6NHP3 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
SPDYE2BA6NHP3 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SPDYE2BA6NHP3 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC22.24■■□□□ 1.15
SPDYE2BA6NHP3 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SPDYE2BA6NHP3 LINC00167-201ENST00000530583 1419 ntBASIC22.23■■□□□ 1.15
SPDYE2BA6NHP3 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC22.23■■□□□ 1.15
SPDYE2BA6NHP3 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
SPDYE2BA6NHP3 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SPDYE2BA6NHP3 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
SPDYE2BA6NHP3 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
SPDYE2BA6NHP3 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
SPDYE2BA6NHP3 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SPDYE2BA6NHP3 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
SPDYE2BA6NHP3 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
SPDYE2BA6NHP3 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
SPDYE2BA6NHP3 IGHGP-201ENST00000390555 1178 ntBASIC22.23■■□□□ 1.15
SPDYE2BA6NHP3 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
SPDYE2BA6NHP3 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC22.23■■□□□ 1.15
SPDYE2BA6NHP3 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SPDYE2BA6NHP3 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC22.23■■□□□ 1.15
SPDYE2BA6NHP3 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC22.23■■□□□ 1.15
SPDYE2BA6NHP3 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
SPDYE2BA6NHP3 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC22.23■■□□□ 1.15
SPDYE2BA6NHP3 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC22.23■■□□□ 1.15
SPDYE2BA6NHP3 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC22.23■■□□□ 1.15
SPDYE2BA6NHP3 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC22.23■■□□□ 1.15
SPDYE2BA6NHP3 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SPDYE2BA6NHP3 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC22.23■■□□□ 1.15
SPDYE2BA6NHP3 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
SPDYE2BA6NHP3 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC22.22■■□□□ 1.15
SPDYE2BA6NHP3 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SPDYE2BA6NHP3 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC22.22■■□□□ 1.15
SPDYE2BA6NHP3 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SPDYE2BA6NHP3 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
SPDYE2BA6NHP3 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
SPDYE2BA6NHP3 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SPDYE2BA6NHP3 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC22.22■■□□□ 1.15
SPDYE2BA6NHP3 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
SPDYE2BA6NHP3 AC106795.1-205ENST00000512851 1056 ntBASIC22.22■■□□□ 1.15
SPDYE2BA6NHP3 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
SPDYE2BA6NHP3 AP002469.2-201ENST00000531724 424 ntBASIC22.22■■□□□ 1.15
SPDYE2BA6NHP3 BMF-207ENST00000559701 630 ntTSL 3 BASIC22.22■■□□□ 1.15
SPDYE2BA6NHP3 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC22.22■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms