Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
TCRBV3S1A0A5B6 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TCRBV3S1A0A5B6 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC17.57■□□□□ 0.4
TCRBV3S1A0A5B6 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC17.57■□□□□ 0.4
TCRBV3S1A0A5B6 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
TCRBV3S1A0A5B6 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC17.57■□□□□ 0.4
TCRBV3S1A0A5B6 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TCRBV3S1A0A5B6 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TCRBV3S1A0A5B6 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.57■□□□□ 0.4
TCRBV3S1A0A5B6 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TCRBV3S1A0A5B6 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TCRBV3S1A0A5B6 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
TCRBV3S1A0A5B6 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TCRBV3S1A0A5B6 AC124067.4-201ENST00000519691 2379 ntBASIC17.57■□□□□ 0.4
TCRBV3S1A0A5B6 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.56■□□□□ 0.4
TCRBV3S1A0A5B6 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.56■□□□□ 0.4
TCRBV3S1A0A5B6 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC17.56■□□□□ 0.4
TCRBV3S1A0A5B6 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.56■□□□□ 0.4
TCRBV3S1A0A5B6 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
TCRBV3S1A0A5B6 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.56■□□□□ 0.4
TCRBV3S1A0A5B6 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.56■□□□□ 0.4
TCRBV3S1A0A5B6 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TCRBV3S1A0A5B6 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TCRBV3S1A0A5B6 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
TCRBV3S1A0A5B6 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TCRBV3S1A0A5B6 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.56■□□□□ 0.4
TCRBV3S1A0A5B6 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.56■□□□□ 0.4
TCRBV3S1A0A5B6 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TCRBV3S1A0A5B6 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TCRBV3S1A0A5B6 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TCRBV3S1A0A5B6 AC034268.1-201ENST00000441047 882 ntBASIC17.56■□□□□ 0.4
TCRBV3S1A0A5B6 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TCRBV3S1A0A5B6 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.56■□□□□ 0.4
TCRBV3S1A0A5B6 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC17.56■□□□□ 0.4
TCRBV3S1A0A5B6 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TCRBV3S1A0A5B6 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TCRBV3S1A0A5B6 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TCRBV3S1A0A5B6 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TCRBV3S1A0A5B6 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
TCRBV3S1A0A5B6 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
TCRBV3S1A0A5B6 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC17.55■□□□□ 0.4
TCRBV3S1A0A5B6 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
TCRBV3S1A0A5B6 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
TCRBV3S1A0A5B6 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.55■□□□□ 0.4
TCRBV3S1A0A5B6 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
TCRBV3S1A0A5B6 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC17.55■□□□□ 0.4
TCRBV3S1A0A5B6 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC17.55■□□□□ 0.4
TCRBV3S1A0A5B6 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.55■□□□□ 0.4
TCRBV3S1A0A5B6 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC17.55■□□□□ 0.4
TCRBV3S1A0A5B6 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
TCRBV3S1A0A5B6 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC17.55■□□□□ 0.4
TCRBV3S1A0A5B6 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TCRBV3S1A0A5B6 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
TCRBV3S1A0A5B6 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TCRBV3S1A0A5B6 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TCRBV3S1A0A5B6 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TCRBV3S1A0A5B6 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.55■□□□□ 0.4
TCRBV3S1A0A5B6 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
TCRBV3S1A0A5B6 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TCRBV3S1A0A5B6 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TCRBV3S1A0A5B6 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TCRBV3S1A0A5B6 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
TCRBV3S1A0A5B6 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
TCRBV3S1A0A5B6 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
TCRBV3S1A0A5B6 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TCRBV3S1A0A5B6 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TCRBV3S1A0A5B6 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TCRBV3S1A0A5B6 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TCRBV3S1A0A5B6 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.54■□□□□ 0.4
TCRBV3S1A0A5B6 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC17.54■□□□□ 0.4
TCRBV3S1A0A5B6 AC016769.1-201ENST00000409132 1010 ntBASIC17.54■□□□□ 0.4
TCRBV3S1A0A5B6 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
TCRBV3S1A0A5B6 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC17.54■□□□□ 0.4
TCRBV3S1A0A5B6 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.54■□□□□ 0.4
TCRBV3S1A0A5B6 PNN-205ENST00000556530 601 ntTSL 2 BASIC17.54■□□□□ 0.4
TCRBV3S1A0A5B6 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
TCRBV3S1A0A5B6 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TCRBV3S1A0A5B6 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TCRBV3S1A0A5B6 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TCRBV3S1A0A5B6 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.54■□□□□ 0.4
TCRBV3S1A0A5B6 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TCRBV3S1A0A5B6 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TCRBV3S1A0A5B6 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TCRBV3S1A0A5B6 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.54■□□□□ 0.4
TCRBV3S1A0A5B6 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TCRBV3S1A0A5B6 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.54■□□□□ 0.4
TCRBV3S1A0A5B6 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
TCRBV3S1A0A5B6 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TCRBV3S1A0A5B6 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.53■□□□□ 0.4
TCRBV3S1A0A5B6 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TCRBV3S1A0A5B6 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TCRBV3S1A0A5B6 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TCRBV3S1A0A5B6 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC17.53■□□□□ 0.4
TCRBV3S1A0A5B6 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.53■□□□□ 0.4
TCRBV3S1A0A5B6 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TCRBV3S1A0A5B6 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.53■□□□□ 0.4
TCRBV3S1A0A5B6 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TCRBV3S1A0A5B6 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TCRBV3S1A0A5B6 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.53■□□□□ 0.4
TCRBV3S1A0A5B6 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms