Protein–RNA interactions for Protein: A0A578

TCRBV5S1A1T, T-cell receptor beta variable 5-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S1A1TA0A578 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TCRBV5S1A1TA0A578 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC19.57■□□□□ 0.72
TCRBV5S1A1TA0A578 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TCRBV5S1A1TA0A578 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC19.57■□□□□ 0.72
TCRBV5S1A1TA0A578 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TCRBV5S1A1TA0A578 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC19.57■□□□□ 0.72
TCRBV5S1A1TA0A578 AC010947.1-201ENST00000623454 693 ntBASIC19.57■□□□□ 0.72
TCRBV5S1A1TA0A578 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
TCRBV5S1A1TA0A578 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TCRBV5S1A1TA0A578 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
TCRBV5S1A1TA0A578 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
TCRBV5S1A1TA0A578 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.57■□□□□ 0.72
TCRBV5S1A1TA0A578 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
TCRBV5S1A1TA0A578 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TCRBV5S1A1TA0A578 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
TCRBV5S1A1TA0A578 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TCRBV5S1A1TA0A578 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TCRBV5S1A1TA0A578 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
TCRBV5S1A1TA0A578 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.56■□□□□ 0.72
TCRBV5S1A1TA0A578 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
TCRBV5S1A1TA0A578 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TCRBV5S1A1TA0A578 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TCRBV5S1A1TA0A578 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.56■□□□□ 0.72
TCRBV5S1A1TA0A578 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.56■□□□□ 0.72
TCRBV5S1A1TA0A578 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
TCRBV5S1A1TA0A578 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TCRBV5S1A1TA0A578 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
TCRBV5S1A1TA0A578 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC19.56■□□□□ 0.72
TCRBV5S1A1TA0A578 ELP6-205ENST00000439305 880 ntTSL 2 BASIC19.56■□□□□ 0.72
TCRBV5S1A1TA0A578 AC093827.2-201ENST00000512654 315 ntBASIC19.56■□□□□ 0.72
TCRBV5S1A1TA0A578 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.56■□□□□ 0.72
TCRBV5S1A1TA0A578 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TCRBV5S1A1TA0A578 MYC-208ENST00000641036 567 ntBASIC19.56■□□□□ 0.72
TCRBV5S1A1TA0A578 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
TCRBV5S1A1TA0A578 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TCRBV5S1A1TA0A578 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
TCRBV5S1A1TA0A578 KRT8P50-201ENST00000562022 1438 ntBASIC19.56■□□□□ 0.72
TCRBV5S1A1TA0A578 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.56■□□□□ 0.72
TCRBV5S1A1TA0A578 MYLKP1-201ENST00000509077 1580 ntBASIC19.56■□□□□ 0.72
TCRBV5S1A1TA0A578 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TCRBV5S1A1TA0A578 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.56■□□□□ 0.72
TCRBV5S1A1TA0A578 AL354751.1-201ENST00000412768 1863 ntBASIC19.56■□□□□ 0.72
TCRBV5S1A1TA0A578 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
TCRBV5S1A1TA0A578 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TCRBV5S1A1TA0A578 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
TCRBV5S1A1TA0A578 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.56■□□□□ 0.72
TCRBV5S1A1TA0A578 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.56■□□□□ 0.72
TCRBV5S1A1TA0A578 COMP-202ENST00000425807 2292 ntTSL 2 BASIC19.55■□□□□ 0.72
TCRBV5S1A1TA0A578 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TCRBV5S1A1TA0A578 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TCRBV5S1A1TA0A578 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TCRBV5S1A1TA0A578 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
TCRBV5S1A1TA0A578 AC036111.1-201ENST00000533973 1582 ntBASIC19.55■□□□□ 0.72
TCRBV5S1A1TA0A578 WWOX-216ENST00000569818 525 ntBASIC19.55■□□□□ 0.72
TCRBV5S1A1TA0A578 CR769767.2-201ENST00000622735 460 ntBASIC19.55■□□□□ 0.72
TCRBV5S1A1TA0A578 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TCRBV5S1A1TA0A578 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TCRBV5S1A1TA0A578 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
TCRBV5S1A1TA0A578 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
TCRBV5S1A1TA0A578 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TCRBV5S1A1TA0A578 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC19.55■□□□□ 0.72
TCRBV5S1A1TA0A578 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TCRBV5S1A1TA0A578 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
TCRBV5S1A1TA0A578 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.54■□□□□ 0.72
TCRBV5S1A1TA0A578 AC034236.2-201ENST00000606662 1610 ntBASIC19.54■□□□□ 0.72
TCRBV5S1A1TA0A578 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TCRBV5S1A1TA0A578 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
TCRBV5S1A1TA0A578 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TCRBV5S1A1TA0A578 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
TCRBV5S1A1TA0A578 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
TCRBV5S1A1TA0A578 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TCRBV5S1A1TA0A578 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TCRBV5S1A1TA0A578 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
TCRBV5S1A1TA0A578 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC19.54■□□□□ 0.72
TCRBV5S1A1TA0A578 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TCRBV5S1A1TA0A578 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.54■□□□□ 0.72
TCRBV5S1A1TA0A578 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC19.54■□□□□ 0.72
TCRBV5S1A1TA0A578 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.54■□□□□ 0.72
TCRBV5S1A1TA0A578 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
TCRBV5S1A1TA0A578 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TCRBV5S1A1TA0A578 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TCRBV5S1A1TA0A578 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.54■□□□□ 0.72
TCRBV5S1A1TA0A578 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
TCRBV5S1A1TA0A578 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC19.54■□□□□ 0.72
TCRBV5S1A1TA0A578 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.54■□□□□ 0.72
TCRBV5S1A1TA0A578 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TCRBV5S1A1TA0A578 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.53■□□□□ 0.72
TCRBV5S1A1TA0A578 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TCRBV5S1A1TA0A578 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TCRBV5S1A1TA0A578 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TCRBV5S1A1TA0A578 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TCRBV5S1A1TA0A578 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.53■□□□□ 0.72
TCRBV5S1A1TA0A578 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TCRBV5S1A1TA0A578 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TCRBV5S1A1TA0A578 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
TCRBV5S1A1TA0A578 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
TCRBV5S1A1TA0A578 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC19.53■□□□□ 0.72
TCRBV5S1A1TA0A578 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19.53■□□□□ 0.72
TCRBV5S1A1TA0A578 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TCRBV5S1A1TA0A578 EGLN1P1-201ENST00000531623 762 ntBASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms