Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRBV5-4A0A0C4DH59 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRBV5-4A0A0C4DH59 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.45■□□□□ 0.54
TRBV5-4A0A0C4DH59 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRBV5-4A0A0C4DH59 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRBV5-4A0A0C4DH59 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRBV5-4A0A0C4DH59 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRBV5-4A0A0C4DH59 AC073592.3-201ENST00000625118 1834 ntBASIC18.44■□□□□ 0.54
TRBV5-4A0A0C4DH59 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRBV5-4A0A0C4DH59 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRBV5-4A0A0C4DH59 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRBV5-4A0A0C4DH59 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRBV5-4A0A0C4DH59 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
TRBV5-4A0A0C4DH59 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRBV5-4A0A0C4DH59 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRBV5-4A0A0C4DH59 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRBV5-4A0A0C4DH59 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
TRBV5-4A0A0C4DH59 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
TRBV5-4A0A0C4DH59 KRT8P50-201ENST00000562022 1438 ntBASIC18.44■□□□□ 0.54
TRBV5-4A0A0C4DH59 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC18.44■□□□□ 0.54
TRBV5-4A0A0C4DH59 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC18.44■□□□□ 0.54
TRBV5-4A0A0C4DH59 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRBV5-4A0A0C4DH59 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRBV5-4A0A0C4DH59 AP000593.1-201ENST00000393668 712 ntBASIC18.44■□□□□ 0.54
TRBV5-4A0A0C4DH59 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.44■□□□□ 0.54
TRBV5-4A0A0C4DH59 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRBV5-4A0A0C4DH59 ECEL1P3-201ENST00000427961 737 ntBASIC18.44■□□□□ 0.54
TRBV5-4A0A0C4DH59 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRBV5-4A0A0C4DH59 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.44■□□□□ 0.54
TRBV5-4A0A0C4DH59 AL138966.2-201ENST00000621997 464 ntBASIC18.44■□□□□ 0.54
TRBV5-4A0A0C4DH59 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.44■□□□□ 0.54
TRBV5-4A0A0C4DH59 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRBV5-4A0A0C4DH59 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRBV5-4A0A0C4DH59 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
TRBV5-4A0A0C4DH59 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRBV5-4A0A0C4DH59 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.44■□□□□ 0.54
TRBV5-4A0A0C4DH59 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
TRBV5-4A0A0C4DH59 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRBV5-4A0A0C4DH59 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRBV5-4A0A0C4DH59 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.44■□□□□ 0.54
TRBV5-4A0A0C4DH59 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRBV5-4A0A0C4DH59 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRBV5-4A0A0C4DH59 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.43■□□□□ 0.54
TRBV5-4A0A0C4DH59 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TRBV5-4A0A0C4DH59 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TRBV5-4A0A0C4DH59 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.43■□□□□ 0.54
TRBV5-4A0A0C4DH59 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRBV5-4A0A0C4DH59 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TRBV5-4A0A0C4DH59 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC18.43■□□□□ 0.54
TRBV5-4A0A0C4DH59 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC18.43■□□□□ 0.54
TRBV5-4A0A0C4DH59 NEK4P2-201ENST00000580004 1012 ntBASIC18.43■□□□□ 0.54
TRBV5-4A0A0C4DH59 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TRBV5-4A0A0C4DH59 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
TRBV5-4A0A0C4DH59 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRBV5-4A0A0C4DH59 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.43■□□□□ 0.54
TRBV5-4A0A0C4DH59 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRBV5-4A0A0C4DH59 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TRBV5-4A0A0C4DH59 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.43■□□□□ 0.54
TRBV5-4A0A0C4DH59 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
TRBV5-4A0A0C4DH59 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRBV5-4A0A0C4DH59 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
TRBV5-4A0A0C4DH59 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC18.43■□□□□ 0.54
TRBV5-4A0A0C4DH59 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.43■□□□□ 0.54
TRBV5-4A0A0C4DH59 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRBV5-4A0A0C4DH59 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TRBV5-4A0A0C4DH59 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
TRBV5-4A0A0C4DH59 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.43■□□□□ 0.54
TRBV5-4A0A0C4DH59 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
TRBV5-4A0A0C4DH59 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRBV5-4A0A0C4DH59 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.42■□□□□ 0.54
TRBV5-4A0A0C4DH59 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
TRBV5-4A0A0C4DH59 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.42■□□□□ 0.54
TRBV5-4A0A0C4DH59 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRBV5-4A0A0C4DH59 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRBV5-4A0A0C4DH59 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRBV5-4A0A0C4DH59 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.42■□□□□ 0.54
TRBV5-4A0A0C4DH59 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRBV5-4A0A0C4DH59 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRBV5-4A0A0C4DH59 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRBV5-4A0A0C4DH59 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRBV5-4A0A0C4DH59 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.42■□□□□ 0.54
TRBV5-4A0A0C4DH59 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC18.42■□□□□ 0.54
TRBV5-4A0A0C4DH59 AC009947.2-201ENST00000444014 672 ntBASIC18.42■□□□□ 0.54
TRBV5-4A0A0C4DH59 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC18.42■□□□□ 0.54
TRBV5-4A0A0C4DH59 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.42■□□□□ 0.54
TRBV5-4A0A0C4DH59 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC18.42■□□□□ 0.54
TRBV5-4A0A0C4DH59 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC18.42■□□□□ 0.54
TRBV5-4A0A0C4DH59 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRBV5-4A0A0C4DH59 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRBV5-4A0A0C4DH59 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRBV5-4A0A0C4DH59 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRBV5-4A0A0C4DH59 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRBV5-4A0A0C4DH59 MYLKP1-201ENST00000509077 1580 ntBASIC18.42■□□□□ 0.54
TRBV5-4A0A0C4DH59 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRBV5-4A0A0C4DH59 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.42■□□□□ 0.54
TRBV5-4A0A0C4DH59 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRBV5-4A0A0C4DH59 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRBV5-4A0A0C4DH59 AC126763.1-201ENST00000552015 2118 ntBASIC18.41■□□□□ 0.54
TRBV5-4A0A0C4DH59 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.41■□□□□ 0.54
TRBV5-4A0A0C4DH59 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms