Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC187A0A096LP49 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.76■□□□□ 0.43
CCDC187A0A096LP49 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
CCDC187A0A096LP49 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC187A0A096LP49 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.76■□□□□ 0.43
CCDC187A0A096LP49 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.76■□□□□ 0.43
CCDC187A0A096LP49 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC187A0A096LP49 AC008556.1-201ENST00000610908 2040 ntBASIC17.76■□□□□ 0.43
CCDC187A0A096LP49 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
CCDC187A0A096LP49 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC187A0A096LP49 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CCDC187A0A096LP49 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC187A0A096LP49 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC187A0A096LP49 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC187A0A096LP49 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CCDC187A0A096LP49 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC17.75■□□□□ 0.43
CCDC187A0A096LP49 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC187A0A096LP49 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC187A0A096LP49 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CCDC187A0A096LP49 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC187A0A096LP49 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC187A0A096LP49 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC187A0A096LP49 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.75■□□□□ 0.43
CCDC187A0A096LP49 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
CCDC187A0A096LP49 AP000347.1-202ENST00000435868 847 ntBASIC17.75■□□□□ 0.43
CCDC187A0A096LP49 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC187A0A096LP49 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC17.75■□□□□ 0.43
CCDC187A0A096LP49 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.75■□□□□ 0.43
CCDC187A0A096LP49 AC005332.3-201ENST00000589904 676 ntBASIC17.75■□□□□ 0.43
CCDC187A0A096LP49 IGHV3-41-201ENST00000613121 348 ntBASIC17.75■□□□□ 0.43
CCDC187A0A096LP49 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC187A0A096LP49 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC187A0A096LP49 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CCDC187A0A096LP49 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC187A0A096LP49 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
CCDC187A0A096LP49 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.75■□□□□ 0.43
CCDC187A0A096LP49 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
CCDC187A0A096LP49 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC187A0A096LP49 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC187A0A096LP49 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.75■□□□□ 0.43
CCDC187A0A096LP49 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CCDC187A0A096LP49 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC187A0A096LP49 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC187A0A096LP49 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC187A0A096LP49 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
CCDC187A0A096LP49 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC187A0A096LP49 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC17.74■□□□□ 0.43
CCDC187A0A096LP49 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC187A0A096LP49 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC187A0A096LP49 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC187A0A096LP49 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC187A0A096LP49 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC17.74■□□□□ 0.43
CCDC187A0A096LP49 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC187A0A096LP49 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CCDC187A0A096LP49 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
CCDC187A0A096LP49 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC17.74■□□□□ 0.43
CCDC187A0A096LP49 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC17.74■□□□□ 0.43
CCDC187A0A096LP49 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.74■□□□□ 0.43
CCDC187A0A096LP49 AC104692.2-201ENST00000603054 253 ntBASIC17.74■□□□□ 0.43
CCDC187A0A096LP49 AL390719.2-201ENST00000606993 987 ntBASIC17.74■□□□□ 0.43
CCDC187A0A096LP49 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC17.74■□□□□ 0.43
CCDC187A0A096LP49 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC17.74■□□□□ 0.43
CCDC187A0A096LP49 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC187A0A096LP49 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC187A0A096LP49 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC187A0A096LP49 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.74■□□□□ 0.43
CCDC187A0A096LP49 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC187A0A096LP49 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
CCDC187A0A096LP49 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC17.73■□□□□ 0.43
CCDC187A0A096LP49 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC187A0A096LP49 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC187A0A096LP49 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC187A0A096LP49 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC187A0A096LP49 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC187A0A096LP49 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC187A0A096LP49 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC17.73■□□□□ 0.43
CCDC187A0A096LP49 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC187A0A096LP49 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC187A0A096LP49 MIR564-202ENST00000385049 94 ntBASIC17.73■□□□□ 0.43
CCDC187A0A096LP49 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC187A0A096LP49 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.73■□□□□ 0.43
CCDC187A0A096LP49 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.73■□□□□ 0.43
CCDC187A0A096LP49 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC17.73■□□□□ 0.43
CCDC187A0A096LP49 AC074051.2-201ENST00000565115 352 ntBASIC17.73■□□□□ 0.43
CCDC187A0A096LP49 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CCDC187A0A096LP49 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC17.73■□□□□ 0.43
CCDC187A0A096LP49 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC187A0A096LP49 TK1-205ENST00000590862 642 ntTSL 3 BASIC17.73■□□□□ 0.43
CCDC187A0A096LP49 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC187A0A096LP49 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.73■□□□□ 0.43
CCDC187A0A096LP49 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC17.73■□□□□ 0.43
CCDC187A0A096LP49 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
CCDC187A0A096LP49 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC187A0A096LP49 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC187A0A096LP49 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
CCDC187A0A096LP49 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
CCDC187A0A096LP49 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC187A0A096LP49 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CCDC187A0A096LP49 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC17.73■□□□□ 0.43
CCDC187A0A096LP49 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms