Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV30A0A087WSZ9 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV30A0A087WSZ9 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV30A0A087WSZ9 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC14.76□□□□□ -0.05
TRAV30A0A087WSZ9 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV30A0A087WSZ9 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC14.76□□□□□ -0.05
TRAV30A0A087WSZ9 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
TRAV30A0A087WSZ9 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC14.76□□□□□ -0.05
TRAV30A0A087WSZ9 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV30A0A087WSZ9 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV30A0A087WSZ9 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV30A0A087WSZ9 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV30A0A087WSZ9 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV30A0A087WSZ9 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV30A0A087WSZ9 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV30A0A087WSZ9 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC14.75□□□□□ -0.05
TRAV30A0A087WSZ9 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC14.75□□□□□ -0.05
TRAV30A0A087WSZ9 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
TRAV30A0A087WSZ9 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
TRAV30A0A087WSZ9 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV30A0A087WSZ9 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV30A0A087WSZ9 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV30A0A087WSZ9 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV30A0A087WSZ9 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV30A0A087WSZ9 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV30A0A087WSZ9 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC14.75□□□□□ -0.05
TRAV30A0A087WSZ9 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
TRAV30A0A087WSZ9 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC14.75□□□□□ -0.05
TRAV30A0A087WSZ9 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC14.75□□□□□ -0.05
TRAV30A0A087WSZ9 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC14.75□□□□□ -0.05
TRAV30A0A087WSZ9 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
TRAV30A0A087WSZ9 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC14.75□□□□□ -0.05
TRAV30A0A087WSZ9 AC110285.5-201ENST00000611501 352 ntBASIC14.75□□□□□ -0.05
TRAV30A0A087WSZ9 AL023875.1-201ENST00000640777 796 ntBASIC14.75□□□□□ -0.05
TRAV30A0A087WSZ9 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV30A0A087WSZ9 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC14.75□□□□□ -0.05
TRAV30A0A087WSZ9 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC14.75□□□□□ -0.05
TRAV30A0A087WSZ9 AC090164.3-201ENST00000610780 2143 ntBASIC14.75□□□□□ -0.05
TRAV30A0A087WSZ9 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC14.75□□□□□ -0.05
TRAV30A0A087WSZ9 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
TRAV30A0A087WSZ9 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV30A0A087WSZ9 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV30A0A087WSZ9 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC14.75□□□□□ -0.05
TRAV30A0A087WSZ9 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV30A0A087WSZ9 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC14.75□□□□□ -0.05
TRAV30A0A087WSZ9 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC14.75□□□□□ -0.05
TRAV30A0A087WSZ9 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC14.75□□□□□ -0.05
TRAV30A0A087WSZ9 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC14.75□□□□□ -0.05
TRAV30A0A087WSZ9 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV30A0A087WSZ9 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
TRAV30A0A087WSZ9 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV30A0A087WSZ9 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV30A0A087WSZ9 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC14.74□□□□□ -0.05
TRAV30A0A087WSZ9 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV30A0A087WSZ9 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV30A0A087WSZ9 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC14.74□□□□□ -0.05
TRAV30A0A087WSZ9 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV30A0A087WSZ9 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC14.74□□□□□ -0.05
TRAV30A0A087WSZ9 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV30A0A087WSZ9 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV30A0A087WSZ9 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
TRAV30A0A087WSZ9 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV30A0A087WSZ9 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV30A0A087WSZ9 PTPA-216ENST00000432651 857 ntTSL 2 BASIC14.74□□□□□ -0.05
TRAV30A0A087WSZ9 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV30A0A087WSZ9 AC133681.1-201ENST00000465482 601 ntBASIC14.74□□□□□ -0.05
TRAV30A0A087WSZ9 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC14.74□□□□□ -0.05
TRAV30A0A087WSZ9 PRSS44-201ENST00000515154 1146 ntBASIC14.74□□□□□ -0.05
TRAV30A0A087WSZ9 LY6E-205ENST00000519611 635 ntTSL 3 BASIC14.74□□□□□ -0.05
TRAV30A0A087WSZ9 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
TRAV30A0A087WSZ9 MMAB-206ENST00000540016 945 ntTSL 3 BASIC14.74□□□□□ -0.05
TRAV30A0A087WSZ9 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV30A0A087WSZ9 EMC9-206ENST00000560403 872 ntTSL 2 BASIC14.74□□□□□ -0.05
TRAV30A0A087WSZ9 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
TRAV30A0A087WSZ9 AL445675.2-201ENST00000620291 557 ntBASIC14.74□□□□□ -0.05
TRAV30A0A087WSZ9 WIZP1-201ENST00000531444 2299 ntBASIC14.74□□□□□ -0.05
TRAV30A0A087WSZ9 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC14.74□□□□□ -0.05
TRAV30A0A087WSZ9 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
TRAV30A0A087WSZ9 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV30A0A087WSZ9 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC14.74□□□□□ -0.05
TRAV30A0A087WSZ9 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC14.74□□□□□ -0.05
TRAV30A0A087WSZ9 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC14.74□□□□□ -0.05
TRAV30A0A087WSZ9 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
TRAV30A0A087WSZ9 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV30A0A087WSZ9 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV30A0A087WSZ9 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC14.74□□□□□ -0.05
TRAV30A0A087WSZ9 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV30A0A087WSZ9 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
TRAV30A0A087WSZ9 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC14.74□□□□□ -0.05
TRAV30A0A087WSZ9 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC14.74□□□□□ -0.05
TRAV30A0A087WSZ9 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC14.73□□□□□ -0.05
TRAV30A0A087WSZ9 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC14.73□□□□□ -0.05
TRAV30A0A087WSZ9 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV30A0A087WSZ9 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
TRAV30A0A087WSZ9 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
TRAV30A0A087WSZ9 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV30A0A087WSZ9 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV30A0A087WSZ9 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV30A0A087WSZ9 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC14.73□□□□□ -0.05
TRAV30A0A087WSZ9 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms