Protein–RNA interactions for Protein: Q9Y6H6

KCNE3, Potassium voltage-gated channel subfamily E member 3, humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNE3Q9Y6H6 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
KCNE3Q9Y6H6 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
KCNE3Q9Y6H6 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC23.42■■□□□ 1.34
KCNE3Q9Y6H6 PEX7-203ENST00000541292 945 ntTSL 5 BASIC23.42■■□□□ 1.34
KCNE3Q9Y6H6 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
KCNE3Q9Y6H6 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
KCNE3Q9Y6H6 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
KCNE3Q9Y6H6 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
KCNE3Q9Y6H6 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC23.41■■□□□ 1.34
KCNE3Q9Y6H6 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC23.41■■□□□ 1.34
KCNE3Q9Y6H6 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC23.41■■□□□ 1.34
KCNE3Q9Y6H6 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC23.41■■□□□ 1.34
KCNE3Q9Y6H6 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
KCNE3Q9Y6H6 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
KCNE3Q9Y6H6 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC23.4■■□□□ 1.34
KCNE3Q9Y6H6 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC23.4■■□□□ 1.34
KCNE3Q9Y6H6 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC23.4■■□□□ 1.34
KCNE3Q9Y6H6 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
KCNE3Q9Y6H6 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC23.39■■□□□ 1.33
KCNE3Q9Y6H6 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
KCNE3Q9Y6H6 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
KCNE3Q9Y6H6 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
KCNE3Q9Y6H6 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
KCNE3Q9Y6H6 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC23.37■■□□□ 1.33
KCNE3Q9Y6H6 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
KCNE3Q9Y6H6 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
KCNE3Q9Y6H6 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
KCNE3Q9Y6H6 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
KCNE3Q9Y6H6 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC23.36■■□□□ 1.33
KCNE3Q9Y6H6 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC23.36■■□□□ 1.33
KCNE3Q9Y6H6 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC23.36■■□□□ 1.33
KCNE3Q9Y6H6 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
KCNE3Q9Y6H6 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC23.35■■□□□ 1.33
KCNE3Q9Y6H6 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
KCNE3Q9Y6H6 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
KCNE3Q9Y6H6 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
KCNE3Q9Y6H6 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC23.34■■□□□ 1.33
KCNE3Q9Y6H6 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
KCNE3Q9Y6H6 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
KCNE3Q9Y6H6 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC23.34■■□□□ 1.33
KCNE3Q9Y6H6 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
KCNE3Q9Y6H6 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
KCNE3Q9Y6H6 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
KCNE3Q9Y6H6 PKM-203ENST00000389093 2279 ntTSL 5 BASIC23.33■■□□□ 1.33
KCNE3Q9Y6H6 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
KCNE3Q9Y6H6 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
KCNE3Q9Y6H6 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
KCNE3Q9Y6H6 LINC01971-201ENST00000617888 1048 ntBASIC23.33■■□□□ 1.33
KCNE3Q9Y6H6 CHML-204ENST00000638121 920 ntTSL 2 BASIC23.33■■□□□ 1.33
KCNE3Q9Y6H6 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
KCNE3Q9Y6H6 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
KCNE3Q9Y6H6 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC23.32■■□□□ 1.32
KCNE3Q9Y6H6 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
KCNE3Q9Y6H6 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
KCNE3Q9Y6H6 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
KCNE3Q9Y6H6 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC23.32■■□□□ 1.32
KCNE3Q9Y6H6 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC23.32■■□□□ 1.32
KCNE3Q9Y6H6 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC23.31■■□□□ 1.32
KCNE3Q9Y6H6 ZNRF2P2-203ENST00000454624 420 ntBASIC23.31■■□□□ 1.32
KCNE3Q9Y6H6 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC23.31■■□□□ 1.32
KCNE3Q9Y6H6 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC23.31■■□□□ 1.32
KCNE3Q9Y6H6 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC23.31■■□□□ 1.32
KCNE3Q9Y6H6 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC23.31■■□□□ 1.32
KCNE3Q9Y6H6 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
KCNE3Q9Y6H6 MLEC-202ENST00000412616 841 ntTSL 3 BASIC23.3■■□□□ 1.32
KCNE3Q9Y6H6 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
KCNE3Q9Y6H6 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC23.3■■□□□ 1.32
KCNE3Q9Y6H6 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
KCNE3Q9Y6H6 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC23.29■■□□□ 1.32
KCNE3Q9Y6H6 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
KCNE3Q9Y6H6 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC23.28■■□□□ 1.32
KCNE3Q9Y6H6 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC23.28■■□□□ 1.32
KCNE3Q9Y6H6 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC23.28■■□□□ 1.32
KCNE3Q9Y6H6 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
KCNE3Q9Y6H6 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC23.27■■□□□ 1.32
KCNE3Q9Y6H6 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC23.27■■□□□ 1.32
KCNE3Q9Y6H6 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
KCNE3Q9Y6H6 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
KCNE3Q9Y6H6 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
KCNE3Q9Y6H6 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
KCNE3Q9Y6H6 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
KCNE3Q9Y6H6 DUX4L11-201ENST00000611504 1267 ntBASIC23.26■■□□□ 1.31
KCNE3Q9Y6H6 DUX4L12-201ENST00000614593 1267 ntBASIC23.26■■□□□ 1.31
KCNE3Q9Y6H6 DUX4L14-201ENST00000621227 1267 ntBASIC23.26■■□□□ 1.31
KCNE3Q9Y6H6 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC23.26■■□□□ 1.31
KCNE3Q9Y6H6 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
KCNE3Q9Y6H6 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
KCNE3Q9Y6H6 DUX4L13-201ENST00000554103 1267 ntBASIC23.25■■□□□ 1.31
KCNE3Q9Y6H6 DUX4L15-201ENST00000611059 1267 ntBASIC23.25■■□□□ 1.31
KCNE3Q9Y6H6 DUX4L23-201ENST00000615195 1269 ntBASIC23.25■■□□□ 1.31
KCNE3Q9Y6H6 DUX4L24-201ENST00000617576 1269 ntBASIC23.25■■□□□ 1.31
KCNE3Q9Y6H6 DUX4L22-201ENST00000618238 1269 ntBASIC23.25■■□□□ 1.31
KCNE3Q9Y6H6 DUX4L20-201ENST00000619712 1269 ntBASIC23.25■■□□□ 1.31
KCNE3Q9Y6H6 DUX4L21-201ENST00000622058 1269 ntBASIC23.25■■□□□ 1.31
KCNE3Q9Y6H6 DUX4L10-201ENST00000622460 1267 ntBASIC23.25■■□□□ 1.31
KCNE3Q9Y6H6 DUX4L25-201ENST00000624915 1269 ntBASIC23.25■■□□□ 1.31
KCNE3Q9Y6H6 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
KCNE3Q9Y6H6 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC23.25■■□□□ 1.31
KCNE3Q9Y6H6 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
KCNE3Q9Y6H6 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms