Protein–RNA interactions for Protein: Q9Y5I4

PCDHAC2, Protocadherin alpha-C2, humanhuman

Predictions only

Length 1,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHAC2Q9Y5I4 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC30.46■■■□□ 2.47
PCDHAC2Q9Y5I4 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
PCDHAC2Q9Y5I4 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC30.46■■■□□ 2.47
PCDHAC2Q9Y5I4 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC30.44■■■□□ 2.46
PCDHAC2Q9Y5I4 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
PCDHAC2Q9Y5I4 ATP5G2P3-201ENST00000429083 425 ntBASIC30.44■■■□□ 2.46
PCDHAC2Q9Y5I4 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC30.43■■■□□ 2.46
PCDHAC2Q9Y5I4 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
PCDHAC2Q9Y5I4 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC30.43■■■□□ 2.46
PCDHAC2Q9Y5I4 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC30.43■■■□□ 2.46
PCDHAC2Q9Y5I4 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
PCDHAC2Q9Y5I4 TSPY13P-201ENST00000338964 914 ntBASIC30.42■■■□□ 2.46
PCDHAC2Q9Y5I4 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
PCDHAC2Q9Y5I4 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
PCDHAC2Q9Y5I4 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC30.41■■■□□ 2.46
PCDHAC2Q9Y5I4 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC30.41■■■□□ 2.46
PCDHAC2Q9Y5I4 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC30.41■■■□□ 2.46
PCDHAC2Q9Y5I4 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
PCDHAC2Q9Y5I4 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
PCDHAC2Q9Y5I4 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC30.41■■■□□ 2.46
PCDHAC2Q9Y5I4 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
PCDHAC2Q9Y5I4 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
PCDHAC2Q9Y5I4 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC30.4■■■□□ 2.46
PCDHAC2Q9Y5I4 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
PCDHAC2Q9Y5I4 GUK1-208ENST00000366728 842 ntTSL 2 BASIC30.39■■■□□ 2.46
PCDHAC2Q9Y5I4 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC30.39■■■□□ 2.46
PCDHAC2Q9Y5I4 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
PCDHAC2Q9Y5I4 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC30.39■■■□□ 2.46
PCDHAC2Q9Y5I4 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC30.38■■■□□ 2.45
PCDHAC2Q9Y5I4 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
PCDHAC2Q9Y5I4 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC30.37■■■□□ 2.45
PCDHAC2Q9Y5I4 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
PCDHAC2Q9Y5I4 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
PCDHAC2Q9Y5I4 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC30.36■■■□□ 2.45
PCDHAC2Q9Y5I4 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC30.36■■■□□ 2.45
PCDHAC2Q9Y5I4 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC30.35■■■□□ 2.45
PCDHAC2Q9Y5I4 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC30.35■■■□□ 2.45
PCDHAC2Q9Y5I4 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
PCDHAC2Q9Y5I4 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC30.34■■■□□ 2.45
PCDHAC2Q9Y5I4 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
PCDHAC2Q9Y5I4 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
PCDHAC2Q9Y5I4 RARRES2P1-201ENST00000474487 481 ntBASIC30.32■■■□□ 2.44
PCDHAC2Q9Y5I4 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC30.32■■■□□ 2.44
PCDHAC2Q9Y5I4 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC30.32■■■□□ 2.44
PCDHAC2Q9Y5I4 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC30.31■■■□□ 2.44
PCDHAC2Q9Y5I4 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
PCDHAC2Q9Y5I4 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC30.31■■■□□ 2.44
PCDHAC2Q9Y5I4 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC30.31■■■□□ 2.44
PCDHAC2Q9Y5I4 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
PCDHAC2Q9Y5I4 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
PCDHAC2Q9Y5I4 AC126177.7-201ENST00000547904 679 ntBASIC30.3■■■□□ 2.44
PCDHAC2Q9Y5I4 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
PCDHAC2Q9Y5I4 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC30.29■■■□□ 2.44
PCDHAC2Q9Y5I4 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC30.29■■■□□ 2.44
PCDHAC2Q9Y5I4 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
PCDHAC2Q9Y5I4 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC30.28■■■□□ 2.44
PCDHAC2Q9Y5I4 AP004833.2-201ENST00000532228 1454 ntBASIC30.28■■■□□ 2.44
PCDHAC2Q9Y5I4 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC30.28■■■□□ 2.44
PCDHAC2Q9Y5I4 AC007029.1-201ENST00000604183 313 ntBASIC30.28■■■□□ 2.44
PCDHAC2Q9Y5I4 AC129492.7-201ENST00000622992 756 ntBASIC30.28■■■□□ 2.44
PCDHAC2Q9Y5I4 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
PCDHAC2Q9Y5I4 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
PCDHAC2Q9Y5I4 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
PCDHAC2Q9Y5I4 AC009831.1-201ENST00000580420 1582 ntBASIC30.28■■■□□ 2.44
PCDHAC2Q9Y5I4 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
PCDHAC2Q9Y5I4 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC30.27■■■□□ 2.44
PCDHAC2Q9Y5I4 AL592293.1-201ENST00000502889 1188 ntBASIC30.27■■■□□ 2.44
PCDHAC2Q9Y5I4 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
PCDHAC2Q9Y5I4 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
PCDHAC2Q9Y5I4 DUX4L18-201ENST00000553347 1267 ntBASIC30.26■■■□□ 2.43
PCDHAC2Q9Y5I4 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC30.25■■■□□ 2.43
PCDHAC2Q9Y5I4 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
PCDHAC2Q9Y5I4 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
PCDHAC2Q9Y5I4 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
PCDHAC2Q9Y5I4 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC30.24■■■□□ 2.43
PCDHAC2Q9Y5I4 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC30.24■■■□□ 2.43
PCDHAC2Q9Y5I4 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
PCDHAC2Q9Y5I4 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
PCDHAC2Q9Y5I4 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
PCDHAC2Q9Y5I4 AL359258.2-201ENST00000564063 1566 ntBASIC30.23■■■□□ 2.43
PCDHAC2Q9Y5I4 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC30.23■■■□□ 2.43
PCDHAC2Q9Y5I4 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC30.23■■■□□ 2.43
PCDHAC2Q9Y5I4 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC30.22■■■□□ 2.43
PCDHAC2Q9Y5I4 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC30.22■■■□□ 2.43
PCDHAC2Q9Y5I4 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC30.22■■■□□ 2.43
PCDHAC2Q9Y5I4 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC30.22■■■□□ 2.43
PCDHAC2Q9Y5I4 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
PCDHAC2Q9Y5I4 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC30.22■■■□□ 2.43
PCDHAC2Q9Y5I4 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
PCDHAC2Q9Y5I4 AC133552.2-201ENST00000619106 1032 ntBASIC30.21■■■□□ 2.43
PCDHAC2Q9Y5I4 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC30.21■■■□□ 2.43
PCDHAC2Q9Y5I4 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
PCDHAC2Q9Y5I4 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
PCDHAC2Q9Y5I4 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC30.2■■■□□ 2.42
PCDHAC2Q9Y5I4 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC30.19■■■□□ 2.42
PCDHAC2Q9Y5I4 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
PCDHAC2Q9Y5I4 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC30.19■■■□□ 2.42
PCDHAC2Q9Y5I4 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
PCDHAC2Q9Y5I4 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC30.19■■■□□ 2.42
PCDHAC2Q9Y5I4 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC30.18■■■□□ 2.42
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms