Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
UBQLN1Q9UMX0 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC27.24■■□□□ 1.95
UBQLN1Q9UMX0 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC27.24■■□□□ 1.95
UBQLN1Q9UMX0 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
UBQLN1Q9UMX0 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC27.24■■□□□ 1.95
UBQLN1Q9UMX0 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC27.23■■□□□ 1.95
UBQLN1Q9UMX0 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
UBQLN1Q9UMX0 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
UBQLN1Q9UMX0 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
UBQLN1Q9UMX0 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC27.22■■□□□ 1.95
UBQLN1Q9UMX0 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC27.22■■□□□ 1.95
UBQLN1Q9UMX0 AC139426.1-201ENST00000568218 2529 ntBASIC27.22■■□□□ 1.95
UBQLN1Q9UMX0 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
UBQLN1Q9UMX0 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
UBQLN1Q9UMX0 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC27.21■■□□□ 1.95
UBQLN1Q9UMX0 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
UBQLN1Q9UMX0 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC27.21■■□□□ 1.95
UBQLN1Q9UMX0 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
UBQLN1Q9UMX0 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
UBQLN1Q9UMX0 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC27.2■■□□□ 1.95
UBQLN1Q9UMX0 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
UBQLN1Q9UMX0 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC27.2■■□□□ 1.94
UBQLN1Q9UMX0 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
UBQLN1Q9UMX0 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
UBQLN1Q9UMX0 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC27.19■■□□□ 1.94
UBQLN1Q9UMX0 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
UBQLN1Q9UMX0 GPX1-201ENST00000419349 1106 ntBASIC27.18■■□□□ 1.94
UBQLN1Q9UMX0 CEP120-209ENST00000515110 606 ntTSL 3 BASIC27.18■■□□□ 1.94
UBQLN1Q9UMX0 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
UBQLN1Q9UMX0 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC27.18■■□□□ 1.94
UBQLN1Q9UMX0 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC27.17■■□□□ 1.94
UBQLN1Q9UMX0 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
UBQLN1Q9UMX0 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
UBQLN1Q9UMX0 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC27.17■■□□□ 1.94
UBQLN1Q9UMX0 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC27.17■■□□□ 1.94
UBQLN1Q9UMX0 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC27.17■■□□□ 1.94
UBQLN1Q9UMX0 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
UBQLN1Q9UMX0 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC27.16■■□□□ 1.94
UBQLN1Q9UMX0 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
UBQLN1Q9UMX0 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
UBQLN1Q9UMX0 AC022413.1-201ENST00000624602 984 ntBASIC27.15■■□□□ 1.94
UBQLN1Q9UMX0 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC27.14■■□□□ 1.94
UBQLN1Q9UMX0 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC27.14■■□□□ 1.94
UBQLN1Q9UMX0 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
UBQLN1Q9UMX0 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC27.14■■□□□ 1.94
UBQLN1Q9UMX0 PROC-203ENST00000409048 1586 ntTSL 5 BASIC27.14■■□□□ 1.93
UBQLN1Q9UMX0 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
UBQLN1Q9UMX0 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC27.13■■□□□ 1.93
UBQLN1Q9UMX0 BRD4-212ENST00000630599 726 ntTSL 2 BASIC27.13■■□□□ 1.93
UBQLN1Q9UMX0 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
UBQLN1Q9UMX0 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC27.13■■□□□ 1.93
UBQLN1Q9UMX0 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC27.12■■□□□ 1.93
UBQLN1Q9UMX0 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC27.12■■□□□ 1.93
UBQLN1Q9UMX0 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC27.12■■□□□ 1.93
UBQLN1Q9UMX0 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC27.12■■□□□ 1.93
UBQLN1Q9UMX0 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
UBQLN1Q9UMX0 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC27.12■■□□□ 1.93
UBQLN1Q9UMX0 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC27.11■■□□□ 1.93
UBQLN1Q9UMX0 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
UBQLN1Q9UMX0 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
UBQLN1Q9UMX0 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
UBQLN1Q9UMX0 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC27.09■■□□□ 1.93
UBQLN1Q9UMX0 AC018358.1-201ENST00000631079 1402 ntBASIC27.09■■□□□ 1.93
UBQLN1Q9UMX0 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
UBQLN1Q9UMX0 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC27.09■■□□□ 1.93
UBQLN1Q9UMX0 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC27.09■■□□□ 1.93
UBQLN1Q9UMX0 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC27.09■■□□□ 1.93
UBQLN1Q9UMX0 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
UBQLN1Q9UMX0 AC060814.1-201ENST00000554326 538 ntBASIC27.08■■□□□ 1.93
UBQLN1Q9UMX0 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
UBQLN1Q9UMX0 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.92
UBQLN1Q9UMX0 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
UBQLN1Q9UMX0 DRD5P2-201ENST00000421395 2012 ntBASIC27.07■■□□□ 1.92
UBQLN1Q9UMX0 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
UBQLN1Q9UMX0 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC27.07■■□□□ 1.92
UBQLN1Q9UMX0 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
UBQLN1Q9UMX0 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
UBQLN1Q9UMX0 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC27.07■■□□□ 1.92
UBQLN1Q9UMX0 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC27.07■■□□□ 1.92
UBQLN1Q9UMX0 AC126177.7-201ENST00000547904 679 ntBASIC27.07■■□□□ 1.92
UBQLN1Q9UMX0 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
UBQLN1Q9UMX0 MED25-210ENST00000612854 801 ntTSL 5 BASIC27.06■■□□□ 1.92
UBQLN1Q9UMX0 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
UBQLN1Q9UMX0 MED25-214ENST00000622402 642 ntTSL 5 BASIC27.06■■□□□ 1.92
UBQLN1Q9UMX0 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
UBQLN1Q9UMX0 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC27.06■■□□□ 1.92
UBQLN1Q9UMX0 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
UBQLN1Q9UMX0 HES4-202ENST00000428771 1040 ntTSL 2 BASIC27.05■■□□□ 1.92
UBQLN1Q9UMX0 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC27.05■■□□□ 1.92
UBQLN1Q9UMX0 RNF126P1-201ENST00000567452 1320 ntBASIC27.05■■□□□ 1.92
UBQLN1Q9UMX0 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC27.05■■□□□ 1.92
UBQLN1Q9UMX0 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
UBQLN1Q9UMX0 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
UBQLN1Q9UMX0 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
UBQLN1Q9UMX0 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC27.03■■□□□ 1.92
UBQLN1Q9UMX0 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
UBQLN1Q9UMX0 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC27.03■■□□□ 1.92
UBQLN1Q9UMX0 RARRES2P2-201ENST00000394842 485 ntBASIC27.02■■□□□ 1.92
UBQLN1Q9UMX0 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC27.02■■□□□ 1.92
UBQLN1Q9UMX0 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC27.02■■□□□ 1.92
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms