Protein–RNA interactions for Protein: Q9H251

CDH23, Cadherin-23, humanhuman

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23Q9H251 DUX4L9-201ENST00000449051 1259 ntBASIC27.4■■□□□ 1.98
CDH23Q9H251 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC27.4■■□□□ 1.98
CDH23Q9H251 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC27.39■■□□□ 1.98
CDH23Q9H251 MOB2-207ENST00000614710 705 ntTSL 5 BASIC27.39■■□□□ 1.98
CDH23Q9H251 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
CDH23Q9H251 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
CDH23Q9H251 AC010980.1-201ENST00000587192 1142 ntBASIC27.38■■□□□ 1.97
CDH23Q9H251 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC27.38■■□□□ 1.97
CDH23Q9H251 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
CDH23Q9H251 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC27.38■■□□□ 1.97
CDH23Q9H251 AC009831.1-201ENST00000580420 1582 ntBASIC27.37■■□□□ 1.97
CDH23Q9H251 RP9P-202ENST00000450133 1212 ntBASIC27.37■■□□□ 1.97
CDH23Q9H251 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
CDH23Q9H251 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
CDH23Q9H251 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
CDH23Q9H251 RPS2-210ENST00000530225 765 ntTSL 2 BASIC27.36■■□□□ 1.97
CDH23Q9H251 MED25-210ENST00000612854 801 ntTSL 5 BASIC27.35■■□□□ 1.97
CDH23Q9H251 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
CDH23Q9H251 MED25-214ENST00000622402 642 ntTSL 5 BASIC27.35■■□□□ 1.97
CDH23Q9H251 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC27.35■■□□□ 1.97
CDH23Q9H251 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC27.35■■□□□ 1.97
CDH23Q9H251 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC27.35■■□□□ 1.97
CDH23Q9H251 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
CDH23Q9H251 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC27.34■■□□□ 1.97
CDH23Q9H251 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC27.34■■□□□ 1.97
CDH23Q9H251 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC27.34■■□□□ 1.97
CDH23Q9H251 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
CDH23Q9H251 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
CDH23Q9H251 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC27.32■■□□□ 1.96
CDH23Q9H251 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC27.32■■□□□ 1.96
CDH23Q9H251 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
CDH23Q9H251 AC127502.1-201ENST00000399971 1502 ntBASIC27.32■■□□□ 1.96
CDH23Q9H251 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC27.32■■□□□ 1.96
CDH23Q9H251 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC27.32■■□□□ 1.96
CDH23Q9H251 ECEL1P2-201ENST00000461596 1295 ntBASIC27.31■■□□□ 1.96
CDH23Q9H251 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC27.3■■□□□ 1.96
CDH23Q9H251 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
CDH23Q9H251 AC103834.1-201ENST00000520383 144 ntBASIC27.3■■□□□ 1.96
CDH23Q9H251 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
CDH23Q9H251 BEX3-202ENST00000372634 753 ntTSL 2 BASIC27.29■■□□□ 1.96
CDH23Q9H251 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
CDH23Q9H251 LSM7-203ENST00000585409 512 ntTSL 2 BASIC27.29■■□□□ 1.96
CDH23Q9H251 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC27.29■■□□□ 1.96
CDH23Q9H251 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC27.29■■□□□ 1.96
CDH23Q9H251 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC27.29■■□□□ 1.96
CDH23Q9H251 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
CDH23Q9H251 AC133552.2-201ENST00000619106 1032 ntBASIC27.28■■□□□ 1.96
CDH23Q9H251 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC27.28■■□□□ 1.96
CDH23Q9H251 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC27.28■■□□□ 1.96
CDH23Q9H251 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
CDH23Q9H251 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC27.27■■□□□ 1.96
CDH23Q9H251 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
CDH23Q9H251 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC27.26■■□□□ 1.96
CDH23Q9H251 SPCS2P3-201ENST00000500401 656 ntBASIC27.26■■□□□ 1.95
CDH23Q9H251 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC27.26■■□□□ 1.95
CDH23Q9H251 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
CDH23Q9H251 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
CDH23Q9H251 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC27.25■■□□□ 1.95
CDH23Q9H251 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC27.25■■□□□ 1.95
CDH23Q9H251 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC27.25■■□□□ 1.95
CDH23Q9H251 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
CDH23Q9H251 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC27.25■■□□□ 1.95
CDH23Q9H251 AL356441.2-201ENST00000443009 864 ntBASIC27.25■■□□□ 1.95
CDH23Q9H251 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
CDH23Q9H251 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
CDH23Q9H251 AC025884.2-201ENST00000553429 711 ntBASIC27.24■■□□□ 1.95
CDH23Q9H251 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
CDH23Q9H251 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC27.23■■□□□ 1.95
CDH23Q9H251 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC27.23■■□□□ 1.95
CDH23Q9H251 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC27.23■■□□□ 1.95
CDH23Q9H251 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC27.23■■□□□ 1.95
CDH23Q9H251 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC27.23■■□□□ 1.95
CDH23Q9H251 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
CDH23Q9H251 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
CDH23Q9H251 PEX7-203ENST00000541292 945 ntTSL 5 BASIC27.22■■□□□ 1.95
CDH23Q9H251 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC27.22■■□□□ 1.95
CDH23Q9H251 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC27.22■■□□□ 1.95
CDH23Q9H251 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
CDH23Q9H251 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC27.22■■□□□ 1.95
CDH23Q9H251 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC27.21■■□□□ 1.95
CDH23Q9H251 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC27.21■■□□□ 1.95
CDH23Q9H251 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC27.21■■□□□ 1.95
CDH23Q9H251 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
CDH23Q9H251 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
CDH23Q9H251 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
CDH23Q9H251 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC27.21■■□□□ 1.95
CDH23Q9H251 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC27.21■■□□□ 1.95
CDH23Q9H251 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
CDH23Q9H251 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC27.2■■□□□ 1.94
CDH23Q9H251 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
CDH23Q9H251 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC27.19■■□□□ 1.94
CDH23Q9H251 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
CDH23Q9H251 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC27.18■■□□□ 1.94
CDH23Q9H251 SMPD5-203ENST00000639008 1464 ntBASIC27.18■■□□□ 1.94
CDH23Q9H251 AC103724.3-201ENST00000564481 992 ntBASIC27.18■■□□□ 1.94
CDH23Q9H251 AC026202.3-201ENST00000600805 1127 ntBASIC27.18■■□□□ 1.94
CDH23Q9H251 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
CDH23Q9H251 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC27.17■■□□□ 1.94
CDH23Q9H251 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC27.17■■□□□ 1.94
CDH23Q9H251 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms