Protein–RNA interactions for Protein: Q9BWD3

RTL8A, Retrotransposon Gag-like protein 8A, humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL8AQ9BWD3 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
RTL8AQ9BWD3 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RTL8AQ9BWD3 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RTL8AQ9BWD3 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC21.48■■□□□ 1.03
RTL8AQ9BWD3 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
RTL8AQ9BWD3 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RTL8AQ9BWD3 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
RTL8AQ9BWD3 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
RTL8AQ9BWD3 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
RTL8AQ9BWD3 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC21.46■■□□□ 1.03
RTL8AQ9BWD3 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
RTL8AQ9BWD3 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
RTL8AQ9BWD3 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RTL8AQ9BWD3 PEX7-203ENST00000541292 945 ntTSL 5 BASIC21.45■■□□□ 1.02
RTL8AQ9BWD3 DUX4L13-201ENST00000554103 1267 ntBASIC21.45■■□□□ 1.02
RTL8AQ9BWD3 DUX4L15-201ENST00000611059 1267 ntBASIC21.45■■□□□ 1.02
RTL8AQ9BWD3 DUX4L23-201ENST00000615195 1269 ntBASIC21.45■■□□□ 1.02
RTL8AQ9BWD3 DUX4L24-201ENST00000617576 1269 ntBASIC21.45■■□□□ 1.02
RTL8AQ9BWD3 DUX4L22-201ENST00000618238 1269 ntBASIC21.45■■□□□ 1.02
RTL8AQ9BWD3 DUX4L20-201ENST00000619712 1269 ntBASIC21.45■■□□□ 1.02
RTL8AQ9BWD3 DUX4L21-201ENST00000622058 1269 ntBASIC21.45■■□□□ 1.02
RTL8AQ9BWD3 DUX4L10-201ENST00000622460 1267 ntBASIC21.45■■□□□ 1.02
RTL8AQ9BWD3 DUX4L25-201ENST00000624915 1269 ntBASIC21.45■■□□□ 1.02
RTL8AQ9BWD3 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
RTL8AQ9BWD3 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RTL8AQ9BWD3 DUX4L11-201ENST00000611504 1267 ntBASIC21.44■■□□□ 1.02
RTL8AQ9BWD3 DUX4L12-201ENST00000614593 1267 ntBASIC21.44■■□□□ 1.02
RTL8AQ9BWD3 DUX4L14-201ENST00000621227 1267 ntBASIC21.44■■□□□ 1.02
RTL8AQ9BWD3 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RTL8AQ9BWD3 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
RTL8AQ9BWD3 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RTL8AQ9BWD3 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RTL8AQ9BWD3 ABHD17AP4-201ENST00000411545 909 ntBASIC21.43■■□□□ 1.02
RTL8AQ9BWD3 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RTL8AQ9BWD3 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RTL8AQ9BWD3 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
RTL8AQ9BWD3 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RTL8AQ9BWD3 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
RTL8AQ9BWD3 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RTL8AQ9BWD3 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RTL8AQ9BWD3 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
RTL8AQ9BWD3 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RTL8AQ9BWD3 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RTL8AQ9BWD3 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RTL8AQ9BWD3 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
RTL8AQ9BWD3 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC21.39■■□□□ 1.02
RTL8AQ9BWD3 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
RTL8AQ9BWD3 CHST11-202ENST00000546689 756 ntTSL 2 BASIC21.39■■□□□ 1.01
RTL8AQ9BWD3 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RTL8AQ9BWD3 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RTL8AQ9BWD3 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RTL8AQ9BWD3 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
RTL8AQ9BWD3 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
RTL8AQ9BWD3 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RTL8AQ9BWD3 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC21.38■■□□□ 1.01
RTL8AQ9BWD3 RPS2-210ENST00000530225 765 ntTSL 2 BASIC21.38■■□□□ 1.01
RTL8AQ9BWD3 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC21.38■■□□□ 1.01
RTL8AQ9BWD3 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
RTL8AQ9BWD3 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RTL8AQ9BWD3 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RTL8AQ9BWD3 AGPS-202ENST00000409888 815 ntTSL 4 BASIC21.37■■□□□ 1.01
RTL8AQ9BWD3 RNF166-209ENST00000567844 633 ntTSL 5 BASIC21.37■■□□□ 1.01
RTL8AQ9BWD3 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RTL8AQ9BWD3 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
RTL8AQ9BWD3 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.37■■□□□ 1.01
RTL8AQ9BWD3 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RTL8AQ9BWD3 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
RTL8AQ9BWD3 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
RTL8AQ9BWD3 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RTL8AQ9BWD3 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RTL8AQ9BWD3 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC21.36■■□□□ 1.01
RTL8AQ9BWD3 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RTL8AQ9BWD3 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
RTL8AQ9BWD3 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
RTL8AQ9BWD3 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
RTL8AQ9BWD3 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RTL8AQ9BWD3 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
RTL8AQ9BWD3 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC21.33■■□□□ 1.01
RTL8AQ9BWD3 AC008813.1-201ENST00000536597 885 ntBASIC21.33■■□□□ 1.01
RTL8AQ9BWD3 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
RTL8AQ9BWD3 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
RTL8AQ9BWD3 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.32■■□□□ 1
RTL8AQ9BWD3 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC21.32■■□□□ 1
RTL8AQ9BWD3 AL121749.1-202ENST00000609313 2153 ntBASIC21.32■■□□□ 1
RTL8AQ9BWD3 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RTL8AQ9BWD3 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
RTL8AQ9BWD3 HES6-205ENST00000409356 528 ntTSL 2 BASIC21.32■■□□□ 1
RTL8AQ9BWD3 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
RTL8AQ9BWD3 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
RTL8AQ9BWD3 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC21.31■■□□□ 1
RTL8AQ9BWD3 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC21.31■■□□□ 1
RTL8AQ9BWD3 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RTL8AQ9BWD3 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RTL8AQ9BWD3 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RTL8AQ9BWD3 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC21.31■■□□□ 1
RTL8AQ9BWD3 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
RTL8AQ9BWD3 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC21.31■■□□□ 1
RTL8AQ9BWD3 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
RTL8AQ9BWD3 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC21.3■■□□□ 1
RTL8AQ9BWD3 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms