Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
HDHD3Q9BSH5 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HDHD3Q9BSH5 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
HDHD3Q9BSH5 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HDHD3Q9BSH5 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HDHD3Q9BSH5 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC21.19■□□□□ 0.98
HDHD3Q9BSH5 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
HDHD3Q9BSH5 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC21.18■□□□□ 0.98
HDHD3Q9BSH5 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HDHD3Q9BSH5 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
HDHD3Q9BSH5 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC21.17■□□□□ 0.98
HDHD3Q9BSH5 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC21.17■□□□□ 0.98
HDHD3Q9BSH5 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC21.17■□□□□ 0.98
HDHD3Q9BSH5 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
HDHD3Q9BSH5 AC135731.1-201ENST00000569415 2548 ntBASIC21.16■□□□□ 0.98
HDHD3Q9BSH5 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
HDHD3Q9BSH5 AC108673.1-201ENST00000510422 1159 ntBASIC21.16■□□□□ 0.98
HDHD3Q9BSH5 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HDHD3Q9BSH5 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
HDHD3Q9BSH5 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
HDHD3Q9BSH5 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
HDHD3Q9BSH5 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HDHD3Q9BSH5 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC21.15■□□□□ 0.98
HDHD3Q9BSH5 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
HDHD3Q9BSH5 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC21.15■□□□□ 0.98
HDHD3Q9BSH5 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
HDHD3Q9BSH5 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
HDHD3Q9BSH5 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
HDHD3Q9BSH5 EI24-212ENST00000615917 1407 ntTSL 2 BASIC21.14■□□□□ 0.98
HDHD3Q9BSH5 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
HDHD3Q9BSH5 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
HDHD3Q9BSH5 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
HDHD3Q9BSH5 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HDHD3Q9BSH5 DUX4L28-201ENST00000623687 678 ntBASIC21.13■□□□□ 0.97
HDHD3Q9BSH5 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
HDHD3Q9BSH5 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HDHD3Q9BSH5 LINC00273-201ENST00000539813 1452 ntBASIC21.13■□□□□ 0.97
HDHD3Q9BSH5 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
HDHD3Q9BSH5 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
HDHD3Q9BSH5 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
HDHD3Q9BSH5 AC091060.1-201ENST00000623524 1766 ntBASIC21.11■□□□□ 0.97
HDHD3Q9BSH5 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
HDHD3Q9BSH5 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HDHD3Q9BSH5 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
HDHD3Q9BSH5 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HDHD3Q9BSH5 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
HDHD3Q9BSH5 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HDHD3Q9BSH5 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HDHD3Q9BSH5 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC21.1■□□□□ 0.97
HDHD3Q9BSH5 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC21.1■□□□□ 0.97
HDHD3Q9BSH5 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HDHD3Q9BSH5 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
HDHD3Q9BSH5 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
HDHD3Q9BSH5 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
HDHD3Q9BSH5 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HDHD3Q9BSH5 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
HDHD3Q9BSH5 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC21.09■□□□□ 0.97
HDHD3Q9BSH5 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HDHD3Q9BSH5 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HDHD3Q9BSH5 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
HDHD3Q9BSH5 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
HDHD3Q9BSH5 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
HDHD3Q9BSH5 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
HDHD3Q9BSH5 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC21.08■□□□□ 0.97
HDHD3Q9BSH5 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
HDHD3Q9BSH5 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
HDHD3Q9BSH5 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
HDHD3Q9BSH5 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC21.07■□□□□ 0.96
HDHD3Q9BSH5 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC21.06■□□□□ 0.96
HDHD3Q9BSH5 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC21.06■□□□□ 0.96
HDHD3Q9BSH5 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
HDHD3Q9BSH5 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HDHD3Q9BSH5 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HDHD3Q9BSH5 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC21.06■□□□□ 0.96
HDHD3Q9BSH5 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC21.05■□□□□ 0.96
HDHD3Q9BSH5 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC21.05■□□□□ 0.96
HDHD3Q9BSH5 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
HDHD3Q9BSH5 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HDHD3Q9BSH5 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC21.04■□□□□ 0.96
HDHD3Q9BSH5 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
HDHD3Q9BSH5 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HDHD3Q9BSH5 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC21.03■□□□□ 0.96
HDHD3Q9BSH5 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC21.02■□□□□ 0.96
HDHD3Q9BSH5 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HDHD3Q9BSH5 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
HDHD3Q9BSH5 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.02■□□□□ 0.96
HDHD3Q9BSH5 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC21.02■□□□□ 0.96
HDHD3Q9BSH5 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
HDHD3Q9BSH5 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC21.02■□□□□ 0.95
HDHD3Q9BSH5 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
HDHD3Q9BSH5 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
HDHD3Q9BSH5 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.95
HDHD3Q9BSH5 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
HDHD3Q9BSH5 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
HDHD3Q9BSH5 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC21■□□□□ 0.95
HDHD3Q9BSH5 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC21■□□□□ 0.95
HDHD3Q9BSH5 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC21■□□□□ 0.95
HDHD3Q9BSH5 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HDHD3Q9BSH5 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HDHD3Q9BSH5 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms