Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC34.5■■■■□ 3.11
ABCA3Q99758 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC34.5■■■■□ 3.11
ABCA3Q99758 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC34.5■■■■□ 3.11
ABCA3Q99758 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC34.49■■■■□ 3.11
ABCA3Q99758 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC34.49■■■■□ 3.11
ABCA3Q99758 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC34.49■■■■□ 3.11
ABCA3Q99758 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC34.48■■■■□ 3.11
ABCA3Q99758 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC34.48■■■■□ 3.11
ABCA3Q99758 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC34.48■■■■□ 3.11
ABCA3Q99758 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC34.47■■■■□ 3.11
ABCA3Q99758 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC34.47■■■■□ 3.11
ABCA3Q99758 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC34.47■■■■□ 3.11
ABCA3Q99758 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC34.47■■■■□ 3.11
ABCA3Q99758 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC34.47■■■■□ 3.11
ABCA3Q99758 REST-210ENST00000638187 1334 ntTSL 5 BASIC34.46■■■■□ 3.11
ABCA3Q99758 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC34.46■■■■□ 3.11
ABCA3Q99758 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC34.46■■■■□ 3.11
ABCA3Q99758 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC34.45■■■■□ 3.11
ABCA3Q99758 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC34.45■■■■□ 3.11
ABCA3Q99758 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC34.45■■■■□ 3.11
ABCA3Q99758 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC34.45■■■■□ 3.11
ABCA3Q99758 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC34.44■■■■□ 3.1
ABCA3Q99758 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC34.44■■■■□ 3.1
ABCA3Q99758 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC34.44■■■■□ 3.1
ABCA3Q99758 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC34.44■■■■□ 3.1
ABCA3Q99758 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC34.44■■■■□ 3.1
ABCA3Q99758 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC34.44■■■■□ 3.1
ABCA3Q99758 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC34.44■■■■□ 3.1
ABCA3Q99758 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC34.44■■■■□ 3.1
ABCA3Q99758 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC34.44■■■■□ 3.1
ABCA3Q99758 DUX4L9-201ENST00000449051 1259 ntBASIC34.44■■■■□ 3.1
ABCA3Q99758 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC34.43■■■■□ 3.1
ABCA3Q99758 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC34.43■■■■□ 3.1
ABCA3Q99758 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC34.42■■■■□ 3.1
ABCA3Q99758 AL592295.1-201ENST00000400984 884 ntBASIC34.42■■■■□ 3.1
ABCA3Q99758 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC34.42■■■■□ 3.1
ABCA3Q99758 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC34.42■■■■□ 3.1
ABCA3Q99758 AC009299.2-201ENST00000482477 511 ntBASIC34.41■■■■□ 3.1
ABCA3Q99758 AC133552.2-201ENST00000619106 1032 ntBASIC34.41■■■■□ 3.1
ABCA3Q99758 MEST-211ENST00000437945 1455 ntTSL 5 BASIC34.41■■■■□ 3.1
ABCA3Q99758 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC34.41■■■■□ 3.1
ABCA3Q99758 DUX4L18-201ENST00000553347 1267 ntBASIC34.41■■■■□ 3.1
ABCA3Q99758 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC34.4■■■■□ 3.1
ABCA3Q99758 AC025884.2-201ENST00000553429 711 ntBASIC34.39■■■■□ 3.1
ABCA3Q99758 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC34.39■■■■□ 3.1
ABCA3Q99758 AL135925.1-201ENST00000605920 1701 ntBASIC34.39■■■■□ 3.1
ABCA3Q99758 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC34.37■■■■□ 3.09
ABCA3Q99758 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC34.37■■■■□ 3.09
ABCA3Q99758 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC34.37■■■■□ 3.09
ABCA3Q99758 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC34.36■■■■□ 3.09
ABCA3Q99758 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC34.36■■■■□ 3.09
ABCA3Q99758 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC34.36■■■■□ 3.09
ABCA3Q99758 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC34.36■■■■□ 3.09
ABCA3Q99758 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC34.36■■■■□ 3.09
ABCA3Q99758 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC34.36■■■■□ 3.09
ABCA3Q99758 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC34.36■■■■□ 3.09
ABCA3Q99758 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC34.36■■■■□ 3.09
ABCA3Q99758 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC34.35■■■■□ 3.09
ABCA3Q99758 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC34.35■■■■□ 3.09
ABCA3Q99758 SPCS2P3-201ENST00000500401 656 ntBASIC34.35■■■■□ 3.09
ABCA3Q99758 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC34.35■■■■□ 3.09
ABCA3Q99758 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC34.34■■■■□ 3.09
ABCA3Q99758 BEX3-202ENST00000372634 753 ntTSL 2 BASIC34.33■■■■□ 3.09
ABCA3Q99758 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC34.33■■■■□ 3.09
ABCA3Q99758 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC34.32■■■■□ 3.09
ABCA3Q99758 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC34.32■■■■□ 3.08
ABCA3Q99758 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC34.32■■■■□ 3.08
ABCA3Q99758 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC34.32■■■■□ 3.08
ABCA3Q99758 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC34.32■■■■□ 3.08
ABCA3Q99758 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC34.32■■■■□ 3.08
ABCA3Q99758 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC34.32■■■■□ 3.08
ABCA3Q99758 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC34.31■■■■□ 3.08
ABCA3Q99758 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC34.31■■■■□ 3.08
ABCA3Q99758 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC34.3■■■■□ 3.08
ABCA3Q99758 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC34.3■■■■□ 3.08
ABCA3Q99758 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC34.28■■■■□ 3.08
ABCA3Q99758 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC34.28■■■■□ 3.08
ABCA3Q99758 RAP2CP1-202ENST00000605179 643 ntBASIC34.27■■■■□ 3.08
ABCA3Q99758 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC34.27■■■■□ 3.08
ABCA3Q99758 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC34.27■■■■□ 3.08
ABCA3Q99758 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC34.27■■■■□ 3.08
ABCA3Q99758 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC34.27■■■■□ 3.08
ABCA3Q99758 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC34.26■■■■□ 3.08
ABCA3Q99758 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC34.26■■■■□ 3.08
ABCA3Q99758 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC34.26■■■■□ 3.07
ABCA3Q99758 MTURN-203ENST00000409688 843 ntTSL 2 BASIC34.26■■■■□ 3.07
ABCA3Q99758 AC093536.1-201ENST00000569153 554 ntBASIC34.26■■■■□ 3.07
ABCA3Q99758 AC026202.3-201ENST00000600805 1127 ntBASIC34.26■■■■□ 3.07
ABCA3Q99758 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC34.26■■■■□ 3.07
ABCA3Q99758 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC34.26■■■■□ 3.07
ABCA3Q99758 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC34.24■■■■□ 3.07
ABCA3Q99758 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC34.24■■■■□ 3.07
ABCA3Q99758 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC34.23■■■■□ 3.07
ABCA3Q99758 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC34.22■■■■□ 3.07
ABCA3Q99758 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC34.22■■■■□ 3.07
ABCA3Q99758 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC34.22■■■■□ 3.07
ABCA3Q99758 KRT8P33-201ENST00000508125 1423 ntBASIC34.22■■■■□ 3.07
ABCA3Q99758 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC34.21■■■■□ 3.07
ABCA3Q99758 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC34.21■■■■□ 3.07
ABCA3Q99758 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC34.21■■■■□ 3.07
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms