Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
NR1H4Q96RI1 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
NR1H4Q96RI1 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
NR1H4Q96RI1 DUSP8P4-201ENST00000399538 1761 ntBASIC23.65■■□□□ 1.38
NR1H4Q96RI1 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
NR1H4Q96RI1 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
NR1H4Q96RI1 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
NR1H4Q96RI1 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
NR1H4Q96RI1 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC23.64■■□□□ 1.37
NR1H4Q96RI1 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC23.64■■□□□ 1.37
NR1H4Q96RI1 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC23.64■■□□□ 1.37
NR1H4Q96RI1 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
NR1H4Q96RI1 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
NR1H4Q96RI1 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.37
NR1H4Q96RI1 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC23.63■■□□□ 1.37
NR1H4Q96RI1 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
NR1H4Q96RI1 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
NR1H4Q96RI1 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
NR1H4Q96RI1 AP004833.2-201ENST00000532228 1454 ntBASIC23.62■■□□□ 1.37
NR1H4Q96RI1 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
NR1H4Q96RI1 AC012676.1-201ENST00000574705 1949 ntBASIC23.62■■□□□ 1.37
NR1H4Q96RI1 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
NR1H4Q96RI1 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
NR1H4Q96RI1 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC23.61■■□□□ 1.37
NR1H4Q96RI1 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
NR1H4Q96RI1 AC133561.1-201ENST00000568600 2415 ntBASIC23.61■■□□□ 1.37
NR1H4Q96RI1 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
NR1H4Q96RI1 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
NR1H4Q96RI1 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
NR1H4Q96RI1 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
NR1H4Q96RI1 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC23.6■■□□□ 1.37
NR1H4Q96RI1 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
NR1H4Q96RI1 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC23.6■■□□□ 1.37
NR1H4Q96RI1 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC23.6■■□□□ 1.37
NR1H4Q96RI1 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
NR1H4Q96RI1 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC23.6■■□□□ 1.37
NR1H4Q96RI1 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
NR1H4Q96RI1 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
NR1H4Q96RI1 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
NR1H4Q96RI1 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC23.6■■□□□ 1.37
NR1H4Q96RI1 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
NR1H4Q96RI1 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
NR1H4Q96RI1 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
NR1H4Q96RI1 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
NR1H4Q96RI1 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
NR1H4Q96RI1 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC23.58■■□□□ 1.37
NR1H4Q96RI1 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
NR1H4Q96RI1 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
NR1H4Q96RI1 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC23.58■■□□□ 1.37
NR1H4Q96RI1 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC23.58■■□□□ 1.37
NR1H4Q96RI1 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
NR1H4Q96RI1 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
NR1H4Q96RI1 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
NR1H4Q96RI1 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
NR1H4Q96RI1 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC23.55■■□□□ 1.36
NR1H4Q96RI1 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC23.55■■□□□ 1.36
NR1H4Q96RI1 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.36
NR1H4Q96RI1 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
NR1H4Q96RI1 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
NR1H4Q96RI1 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.36
NR1H4Q96RI1 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
NR1H4Q96RI1 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
NR1H4Q96RI1 LINC00543-201ENST00000567234 1845 ntBASIC23.54■■□□□ 1.36
NR1H4Q96RI1 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC23.54■■□□□ 1.36
NR1H4Q96RI1 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
NR1H4Q96RI1 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
NR1H4Q96RI1 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
NR1H4Q96RI1 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
NR1H4Q96RI1 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
NR1H4Q96RI1 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC23.53■■□□□ 1.36
NR1H4Q96RI1 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC23.53■■□□□ 1.36
NR1H4Q96RI1 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC23.52■■□□□ 1.36
NR1H4Q96RI1 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
NR1H4Q96RI1 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
NR1H4Q96RI1 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
NR1H4Q96RI1 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC23.52■■□□□ 1.36
NR1H4Q96RI1 CEBPA-AS1-201ENST00000592982 2198 ntBASIC23.52■■□□□ 1.36
NR1H4Q96RI1 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
NR1H4Q96RI1 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC23.51■■□□□ 1.35
NR1H4Q96RI1 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC23.51■■□□□ 1.35
NR1H4Q96RI1 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
NR1H4Q96RI1 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC23.5■■□□□ 1.35
NR1H4Q96RI1 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
NR1H4Q96RI1 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
NR1H4Q96RI1 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC23.5■■□□□ 1.35
NR1H4Q96RI1 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC23.5■■□□□ 1.35
NR1H4Q96RI1 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
NR1H4Q96RI1 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
NR1H4Q96RI1 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
NR1H4Q96RI1 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
NR1H4Q96RI1 ERN1-208ENST00000606895 2068 ntBASIC23.48■■□□□ 1.35
NR1H4Q96RI1 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC23.48■■□□□ 1.35
NR1H4Q96RI1 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
NR1H4Q96RI1 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC23.48■■□□□ 1.35
NR1H4Q96RI1 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC23.48■■□□□ 1.35
NR1H4Q96RI1 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
NR1H4Q96RI1 AC092803.2-201ENST00000564287 1899 ntBASIC23.47■■□□□ 1.35
NR1H4Q96RI1 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
NR1H4Q96RI1 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
NR1H4Q96RI1 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC23.46■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 121.1 ms