Protein–RNA interactions for Protein: Q96MT3

PRICKLE1, Prickle-like protein 1, humanhuman

Predicted RBP Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE1Q96MT3 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC26.09■■□□□ 1.77
PRICKLE1Q96MT3 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC26.08■■□□□ 1.77
PRICKLE1Q96MT3 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
PRICKLE1Q96MT3 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC26.08■■□□□ 1.77
PRICKLE1Q96MT3 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC26.08■■□□□ 1.77
PRICKLE1Q96MT3 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC26.07■■□□□ 1.76
PRICKLE1Q96MT3 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
PRICKLE1Q96MT3 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC26.06■■□□□ 1.76
PRICKLE1Q96MT3 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
PRICKLE1Q96MT3 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
PRICKLE1Q96MT3 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC26.06■■□□□ 1.76
PRICKLE1Q96MT3 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
PRICKLE1Q96MT3 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC26.06■■□□□ 1.76
PRICKLE1Q96MT3 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
PRICKLE1Q96MT3 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC26.05■■□□□ 1.76
PRICKLE1Q96MT3 MIR219A2-201ENST00000608502 1504 ntBASIC26.04■■□□□ 1.76
PRICKLE1Q96MT3 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
PRICKLE1Q96MT3 ABHD17AP3-201ENST00000503096 1137 ntBASIC26.04■■□□□ 1.76
PRICKLE1Q96MT3 AP002414.2-202ENST00000590929 1450 ntBASIC26.04■■□□□ 1.76
PRICKLE1Q96MT3 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
PRICKLE1Q96MT3 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
PRICKLE1Q96MT3 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
PRICKLE1Q96MT3 HSD17B1P1-201ENST00000590052 955 ntBASIC26.03■■□□□ 1.76
PRICKLE1Q96MT3 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
PRICKLE1Q96MT3 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
PRICKLE1Q96MT3 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
PRICKLE1Q96MT3 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
PRICKLE1Q96MT3 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC26.02■■□□□ 1.76
PRICKLE1Q96MT3 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
PRICKLE1Q96MT3 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
PRICKLE1Q96MT3 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC26.01■■□□□ 1.75
PRICKLE1Q96MT3 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
PRICKLE1Q96MT3 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
PRICKLE1Q96MT3 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC26■■□□□ 1.75
PRICKLE1Q96MT3 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
PRICKLE1Q96MT3 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC26■■□□□ 1.75
PRICKLE1Q96MT3 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC26■■□□□ 1.75
PRICKLE1Q96MT3 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
PRICKLE1Q96MT3 TPT1-202ENST00000379055 948 ntTSL 2 BASIC26■■□□□ 1.75
PRICKLE1Q96MT3 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC26■■□□□ 1.75
PRICKLE1Q96MT3 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
PRICKLE1Q96MT3 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC26■■□□□ 1.75
PRICKLE1Q96MT3 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC25.99■■□□□ 1.75
PRICKLE1Q96MT3 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC25.99■■□□□ 1.75
PRICKLE1Q96MT3 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
PRICKLE1Q96MT3 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC25.99■■□□□ 1.75
PRICKLE1Q96MT3 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
PRICKLE1Q96MT3 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC25.98■■□□□ 1.75
PRICKLE1Q96MT3 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC25.98■■□□□ 1.75
PRICKLE1Q96MT3 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
PRICKLE1Q96MT3 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
PRICKLE1Q96MT3 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
PRICKLE1Q96MT3 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
PRICKLE1Q96MT3 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
PRICKLE1Q96MT3 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC25.96■■□□□ 1.75
PRICKLE1Q96MT3 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC25.96■■□□□ 1.75
PRICKLE1Q96MT3 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC25.96■■□□□ 1.75
PRICKLE1Q96MT3 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
PRICKLE1Q96MT3 DRD5P2-201ENST00000421395 2012 ntBASIC25.96■■□□□ 1.75
PRICKLE1Q96MT3 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
PRICKLE1Q96MT3 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC25.95■■□□□ 1.75
PRICKLE1Q96MT3 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC25.95■■□□□ 1.74
PRICKLE1Q96MT3 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
PRICKLE1Q96MT3 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC25.95■■□□□ 1.74
PRICKLE1Q96MT3 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC25.95■■□□□ 1.74
PRICKLE1Q96MT3 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC25.94■■□□□ 1.74
PRICKLE1Q96MT3 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
PRICKLE1Q96MT3 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
PRICKLE1Q96MT3 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC25.94■■□□□ 1.74
PRICKLE1Q96MT3 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
PRICKLE1Q96MT3 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
PRICKLE1Q96MT3 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
PRICKLE1Q96MT3 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
PRICKLE1Q96MT3 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
PRICKLE1Q96MT3 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
PRICKLE1Q96MT3 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
PRICKLE1Q96MT3 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC25.92■■□□□ 1.74
PRICKLE1Q96MT3 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
PRICKLE1Q96MT3 GPX1-201ENST00000419349 1106 ntBASIC25.91■■□□□ 1.74
PRICKLE1Q96MT3 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC25.91■■□□□ 1.74
PRICKLE1Q96MT3 PROC-203ENST00000409048 1586 ntTSL 5 BASIC25.9■■□□□ 1.74
PRICKLE1Q96MT3 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
PRICKLE1Q96MT3 CEP120-209ENST00000515110 606 ntTSL 3 BASIC25.89■■□□□ 1.74
PRICKLE1Q96MT3 BRD4-212ENST00000630599 726 ntTSL 2 BASIC25.89■■□□□ 1.74
PRICKLE1Q96MT3 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC25.89■■□□□ 1.73
PRICKLE1Q96MT3 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
PRICKLE1Q96MT3 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC25.88■■□□□ 1.73
PRICKLE1Q96MT3 MED25-210ENST00000612854 801 ntTSL 5 BASIC25.88■■□□□ 1.73
PRICKLE1Q96MT3 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC25.88■■□□□ 1.73
PRICKLE1Q96MT3 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
PRICKLE1Q96MT3 MED25-214ENST00000622402 642 ntTSL 5 BASIC25.88■■□□□ 1.73
PRICKLE1Q96MT3 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC25.88■■□□□ 1.73
PRICKLE1Q96MT3 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
PRICKLE1Q96MT3 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC25.87■■□□□ 1.73
PRICKLE1Q96MT3 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC25.87■■□□□ 1.73
PRICKLE1Q96MT3 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
PRICKLE1Q96MT3 AC018358.1-201ENST00000631079 1402 ntBASIC25.87■■□□□ 1.73
PRICKLE1Q96MT3 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
PRICKLE1Q96MT3 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC25.86■■□□□ 1.73
PRICKLE1Q96MT3 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC25.86■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms