Protein–RNA interactions for Protein: Q96MP5

ZSWIM3, Zinc finger SWIM domain-containing protein 3, humanhuman

Predictions only

Length 696 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZSWIM3Q96MP5 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC26.32■■□□□ 1.8
ZSWIM3Q96MP5 KRT18P60-201ENST00000312876 1297 ntBASIC26.32■■□□□ 1.8
ZSWIM3Q96MP5 MOB2-207ENST00000614710 705 ntTSL 5 BASIC26.32■■□□□ 1.8
ZSWIM3Q96MP5 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC26.32■■□□□ 1.8
ZSWIM3Q96MP5 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC26.31■■□□□ 1.8
ZSWIM3Q96MP5 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
ZSWIM3Q96MP5 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC26.3■■□□□ 1.8
ZSWIM3Q96MP5 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
ZSWIM3Q96MP5 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
ZSWIM3Q96MP5 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC26.29■■□□□ 1.8
ZSWIM3Q96MP5 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
ZSWIM3Q96MP5 AL157400.5-201ENST00000507624 621 ntBASIC26.29■■□□□ 1.8
ZSWIM3Q96MP5 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC26.29■■□□□ 1.8
ZSWIM3Q96MP5 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC26.29■■□□□ 1.8
ZSWIM3Q96MP5 AC126177.7-201ENST00000547904 679 ntBASIC26.28■■□□□ 1.8
ZSWIM3Q96MP5 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
ZSWIM3Q96MP5 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
ZSWIM3Q96MP5 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC26.28■■□□□ 1.8
ZSWIM3Q96MP5 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
ZSWIM3Q96MP5 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC26.27■■□□□ 1.8
ZSWIM3Q96MP5 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
ZSWIM3Q96MP5 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC26.27■■□□□ 1.8
ZSWIM3Q96MP5 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC26.27■■□□□ 1.8
ZSWIM3Q96MP5 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC26.27■■□□□ 1.8
ZSWIM3Q96MP5 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
ZSWIM3Q96MP5 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
ZSWIM3Q96MP5 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
ZSWIM3Q96MP5 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC26.25■■□□□ 1.79
ZSWIM3Q96MP5 AC004987.1-201ENST00000428627 508 ntBASIC26.25■■□□□ 1.79
ZSWIM3Q96MP5 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
ZSWIM3Q96MP5 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
ZSWIM3Q96MP5 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC26.24■■□□□ 1.79
ZSWIM3Q96MP5 GFER-205ENST00000569451 517 ntTSL 5 BASIC26.24■■□□□ 1.79
ZSWIM3Q96MP5 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC26.24■■□□□ 1.79
ZSWIM3Q96MP5 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
ZSWIM3Q96MP5 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
ZSWIM3Q96MP5 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC26.23■■□□□ 1.79
ZSWIM3Q96MP5 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
ZSWIM3Q96MP5 TSPY13P-201ENST00000338964 914 ntBASIC26.22■■□□□ 1.79
ZSWIM3Q96MP5 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
ZSWIM3Q96MP5 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC26.22■■□□□ 1.79
ZSWIM3Q96MP5 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
ZSWIM3Q96MP5 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
ZSWIM3Q96MP5 ATP5G2P3-201ENST00000429083 425 ntBASIC26.21■■□□□ 1.79
ZSWIM3Q96MP5 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC26.21■■□□□ 1.79
ZSWIM3Q96MP5 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC26.21■■□□□ 1.79
ZSWIM3Q96MP5 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC26.2■■□□□ 1.78
ZSWIM3Q96MP5 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
ZSWIM3Q96MP5 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC26.2■■□□□ 1.78
ZSWIM3Q96MP5 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC26.19■■□□□ 1.78
ZSWIM3Q96MP5 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
ZSWIM3Q96MP5 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
ZSWIM3Q96MP5 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC26.19■■□□□ 1.78
ZSWIM3Q96MP5 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
ZSWIM3Q96MP5 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC26.18■■□□□ 1.78
ZSWIM3Q96MP5 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC26.18■■□□□ 1.78
ZSWIM3Q96MP5 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC26.18■■□□□ 1.78
ZSWIM3Q96MP5 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
ZSWIM3Q96MP5 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC26.17■■□□□ 1.78
ZSWIM3Q96MP5 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
ZSWIM3Q96MP5 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
ZSWIM3Q96MP5 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC26.16■■□□□ 1.78
ZSWIM3Q96MP5 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC26.16■■□□□ 1.78
ZSWIM3Q96MP5 AL139393.2-201ENST00000608721 2025 ntBASIC26.16■■□□□ 1.78
ZSWIM3Q96MP5 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
ZSWIM3Q96MP5 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC26.15■■□□□ 1.78
ZSWIM3Q96MP5 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC26.15■■□□□ 1.78
ZSWIM3Q96MP5 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
ZSWIM3Q96MP5 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC26.15■■□□□ 1.78
ZSWIM3Q96MP5 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC26.15■■□□□ 1.78
ZSWIM3Q96MP5 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
ZSWIM3Q96MP5 GUK1-208ENST00000366728 842 ntTSL 2 BASIC26.15■■□□□ 1.78
ZSWIM3Q96MP5 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC26.15■■□□□ 1.78
ZSWIM3Q96MP5 AC007029.1-201ENST00000604183 313 ntBASIC26.15■■□□□ 1.78
ZSWIM3Q96MP5 AL359258.2-201ENST00000564063 1566 ntBASIC26.15■■□□□ 1.78
ZSWIM3Q96MP5 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC26.15■■□□□ 1.78
ZSWIM3Q96MP5 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
ZSWIM3Q96MP5 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC26.14■■□□□ 1.78
ZSWIM3Q96MP5 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC26.14■■□□□ 1.78
ZSWIM3Q96MP5 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
ZSWIM3Q96MP5 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC26.13■■□□□ 1.77
ZSWIM3Q96MP5 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC26.13■■□□□ 1.77
ZSWIM3Q96MP5 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
ZSWIM3Q96MP5 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
ZSWIM3Q96MP5 ABCB10P3-201ENST00000561950 2166 ntBASIC26.12■■□□□ 1.77
ZSWIM3Q96MP5 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC26.12■■□□□ 1.77
ZSWIM3Q96MP5 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC26.12■■□□□ 1.77
ZSWIM3Q96MP5 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
ZSWIM3Q96MP5 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
ZSWIM3Q96MP5 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC26.11■■□□□ 1.77
ZSWIM3Q96MP5 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
ZSWIM3Q96MP5 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
ZSWIM3Q96MP5 AC009831.1-201ENST00000580420 1582 ntBASIC26.1■■□□□ 1.77
ZSWIM3Q96MP5 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC26.1■■□□□ 1.77
ZSWIM3Q96MP5 SMPD5-203ENST00000639008 1464 ntBASIC26.1■■□□□ 1.77
ZSWIM3Q96MP5 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC26.09■■□□□ 1.77
ZSWIM3Q96MP5 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC26.09■■□□□ 1.77
ZSWIM3Q96MP5 AC129492.7-201ENST00000622992 756 ntBASIC26.09■■□□□ 1.77
ZSWIM3Q96MP5 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC26.09■■□□□ 1.77
ZSWIM3Q96MP5 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC26.08■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms