Protein–RNA interactions for Protein: Q96K30

RITA1, RBPJ-interacting and tubulin-associated protein 1, humanhuman

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1Q96K30 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RITA1Q96K30 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RITA1Q96K30 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC20.24■□□□□ 0.83
RITA1Q96K30 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC20.24■□□□□ 0.83
RITA1Q96K30 AC018358.1-201ENST00000631079 1402 ntBASIC20.24■□□□□ 0.83
RITA1Q96K30 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
RITA1Q96K30 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RITA1Q96K30 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RITA1Q96K30 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RITA1Q96K30 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
RITA1Q96K30 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RITA1Q96K30 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RITA1Q96K30 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
RITA1Q96K30 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
RITA1Q96K30 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RITA1Q96K30 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RITA1Q96K30 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RITA1Q96K30 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RITA1Q96K30 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RITA1Q96K30 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC20.21■□□□□ 0.83
RITA1Q96K30 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
RITA1Q96K30 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RITA1Q96K30 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
RITA1Q96K30 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC20.2■□□□□ 0.83
RITA1Q96K30 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RITA1Q96K30 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RITA1Q96K30 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC20.2■□□□□ 0.82
RITA1Q96K30 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC20.2■□□□□ 0.82
RITA1Q96K30 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC20.2■□□□□ 0.82
RITA1Q96K30 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RITA1Q96K30 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC20.2■□□□□ 0.82
RITA1Q96K30 AL121749.1-202ENST00000609313 2153 ntBASIC20.19■□□□□ 0.82
RITA1Q96K30 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
RITA1Q96K30 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC20.19■□□□□ 0.82
RITA1Q96K30 CHST11-202ENST00000546689 756 ntTSL 2 BASIC20.19■□□□□ 0.82
RITA1Q96K30 RNF166-209ENST00000567844 633 ntTSL 5 BASIC20.19■□□□□ 0.82
RITA1Q96K30 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
RITA1Q96K30 SHF-208ENST00000560734 1731 ntTSL 3 BASIC20.19■□□□□ 0.82
RITA1Q96K30 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RITA1Q96K30 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RITA1Q96K30 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RITA1Q96K30 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RITA1Q96K30 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC20.17■□□□□ 0.82
RITA1Q96K30 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
RITA1Q96K30 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RITA1Q96K30 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RITA1Q96K30 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
RITA1Q96K30 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
RITA1Q96K30 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC20.16■□□□□ 0.82
RITA1Q96K30 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
RITA1Q96K30 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RITA1Q96K30 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC20.16■□□□□ 0.82
RITA1Q96K30 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RITA1Q96K30 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
RITA1Q96K30 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
RITA1Q96K30 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RITA1Q96K30 HES6-205ENST00000409356 528 ntTSL 2 BASIC20.15■□□□□ 0.82
RITA1Q96K30 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC20.15■□□□□ 0.82
RITA1Q96K30 CR559946.2-201ENST00000623684 991 ntBASIC20.15■□□□□ 0.82
RITA1Q96K30 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
RITA1Q96K30 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RITA1Q96K30 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RITA1Q96K30 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
RITA1Q96K30 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
RITA1Q96K30 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
RITA1Q96K30 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RITA1Q96K30 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
RITA1Q96K30 MIR7108-201ENST00000614319 87 ntBASIC20.14■□□□□ 0.81
RITA1Q96K30 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
RITA1Q96K30 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RITA1Q96K30 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
RITA1Q96K30 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RITA1Q96K30 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RITA1Q96K30 RPS2-210ENST00000530225 765 ntTSL 2 BASIC20.13■□□□□ 0.81
RITA1Q96K30 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
RITA1Q96K30 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC20.12■□□□□ 0.81
RITA1Q96K30 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC20.12■□□□□ 0.81
RITA1Q96K30 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
RITA1Q96K30 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
RITA1Q96K30 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
RITA1Q96K30 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RITA1Q96K30 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
RITA1Q96K30 MIR3648-2-201ENST00000581792 180 ntBASIC20.11■□□□□ 0.81
RITA1Q96K30 MIR3648-1-201ENST00000615959 180 ntBASIC20.11■□□□□ 0.81
RITA1Q96K30 GDI1-215ENST00000630693 786 ntTSL 4 BASIC20.11■□□□□ 0.81
RITA1Q96K30 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC20.11■□□□□ 0.81
RITA1Q96K30 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RITA1Q96K30 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC20.1■□□□□ 0.81
RITA1Q96K30 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
RITA1Q96K30 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
RITA1Q96K30 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
RITA1Q96K30 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RITA1Q96K30 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
RITA1Q96K30 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC20.09■□□□□ 0.81
RITA1Q96K30 AGPS-202ENST00000409888 815 ntTSL 4 BASIC20.09■□□□□ 0.81
RITA1Q96K30 PVT1-219ENST00000523427 938 ntTSL 3 BASIC20.09■□□□□ 0.81
RITA1Q96K30 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC20.09■□□□□ 0.81
RITA1Q96K30 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RITA1Q96K30 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RITA1Q96K30 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms