Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC28.91■■■□□ 2.22
USP6NLQ92738 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC28.91■■■□□ 2.22
USP6NLQ92738 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
USP6NLQ92738 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC28.9■■■□□ 2.22
USP6NLQ92738 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
USP6NLQ92738 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC28.9■■■□□ 2.22
USP6NLQ92738 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
USP6NLQ92738 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC28.89■■■□□ 2.22
USP6NLQ92738 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC28.88■■■□□ 2.21
USP6NLQ92738 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC28.88■■■□□ 2.21
USP6NLQ92738 AC009831.1-201ENST00000580420 1582 ntBASIC28.87■■■□□ 2.21
USP6NLQ92738 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC28.87■■■□□ 2.21
USP6NLQ92738 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
USP6NLQ92738 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC28.86■■■□□ 2.21
USP6NLQ92738 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
USP6NLQ92738 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC28.86■■■□□ 2.21
USP6NLQ92738 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
USP6NLQ92738 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
USP6NLQ92738 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
USP6NLQ92738 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC28.85■■■□□ 2.21
USP6NLQ92738 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
USP6NLQ92738 AL592293.1-201ENST00000502889 1188 ntBASIC28.85■■■□□ 2.21
USP6NLQ92738 HES4-204ENST00000484667 667 ntTSL 3 BASIC28.84■■■□□ 2.21
USP6NLQ92738 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC28.84■■■□□ 2.21
USP6NLQ92738 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC28.84■■■□□ 2.21
USP6NLQ92738 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC28.84■■■□□ 2.21
USP6NLQ92738 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
USP6NLQ92738 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC28.83■■■□□ 2.21
USP6NLQ92738 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC28.83■■■□□ 2.21
USP6NLQ92738 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
USP6NLQ92738 AC133552.2-201ENST00000619106 1032 ntBASIC28.82■■■□□ 2.2
USP6NLQ92738 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC28.82■■■□□ 2.2
USP6NLQ92738 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
USP6NLQ92738 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC28.82■■■□□ 2.2
USP6NLQ92738 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
USP6NLQ92738 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC28.81■■■□□ 2.2
USP6NLQ92738 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
USP6NLQ92738 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC28.81■■■□□ 2.2
USP6NLQ92738 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
USP6NLQ92738 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
USP6NLQ92738 DUX4L18-201ENST00000553347 1267 ntBASIC28.81■■■□□ 2.2
USP6NLQ92738 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
USP6NLQ92738 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC28.8■■■□□ 2.2
USP6NLQ92738 REST-210ENST00000638187 1334 ntTSL 5 BASIC28.8■■■□□ 2.2
USP6NLQ92738 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC28.8■■■□□ 2.2
USP6NLQ92738 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC28.8■■■□□ 2.2
USP6NLQ92738 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
USP6NLQ92738 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
USP6NLQ92738 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
USP6NLQ92738 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC28.79■■■□□ 2.2
USP6NLQ92738 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
USP6NLQ92738 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC28.77■■■□□ 2.2
USP6NLQ92738 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
USP6NLQ92738 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
USP6NLQ92738 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC28.76■■■□□ 2.19
USP6NLQ92738 SMPD5-203ENST00000639008 1464 ntBASIC28.76■■■□□ 2.19
USP6NLQ92738 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC28.76■■■□□ 2.19
USP6NLQ92738 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
USP6NLQ92738 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC28.76■■■□□ 2.19
USP6NLQ92738 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC28.75■■■□□ 2.19
USP6NLQ92738 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC28.75■■■□□ 2.19
USP6NLQ92738 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC28.75■■■□□ 2.19
USP6NLQ92738 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC28.75■■■□□ 2.19
USP6NLQ92738 AC026202.3-201ENST00000600805 1127 ntBASIC28.75■■■□□ 2.19
USP6NLQ92738 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC28.74■■■□□ 2.19
USP6NLQ92738 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC28.74■■■□□ 2.19
USP6NLQ92738 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
USP6NLQ92738 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC28.74■■■□□ 2.19
USP6NLQ92738 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC28.74■■■□□ 2.19
USP6NLQ92738 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
USP6NLQ92738 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC28.74■■■□□ 2.19
USP6NLQ92738 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC28.74■■■□□ 2.19
USP6NLQ92738 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
USP6NLQ92738 AP004833.2-201ENST00000532228 1454 ntBASIC28.73■■■□□ 2.19
USP6NLQ92738 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC28.73■■■□□ 2.19
USP6NLQ92738 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC28.73■■■□□ 2.19
USP6NLQ92738 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC28.72■■■□□ 2.19
USP6NLQ92738 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC28.72■■■□□ 2.19
USP6NLQ92738 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC28.72■■■□□ 2.19
USP6NLQ92738 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC28.71■■■□□ 2.19
USP6NLQ92738 AC025884.2-201ENST00000553429 711 ntBASIC28.71■■■□□ 2.19
USP6NLQ92738 AL035685.1-201ENST00000636663 812 ntBASIC28.71■■■□□ 2.19
USP6NLQ92738 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC28.71■■■□□ 2.19
USP6NLQ92738 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC28.7■■■□□ 2.19
USP6NLQ92738 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC28.69■■■□□ 2.18
USP6NLQ92738 AL451085.2-201ENST00000605085 799 ntBASIC28.69■■■□□ 2.18
USP6NLQ92738 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC28.69■■■□□ 2.18
USP6NLQ92738 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
USP6NLQ92738 AL359258.2-201ENST00000564063 1566 ntBASIC28.68■■■□□ 2.18
USP6NLQ92738 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC28.68■■■□□ 2.18
USP6NLQ92738 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC28.68■■■□□ 2.18
USP6NLQ92738 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC28.68■■■□□ 2.18
USP6NLQ92738 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC28.68■■■□□ 2.18
USP6NLQ92738 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC28.67■■■□□ 2.18
USP6NLQ92738 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
USP6NLQ92738 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
USP6NLQ92738 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC28.66■■■□□ 2.18
USP6NLQ92738 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
USP6NLQ92738 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
USP6NLQ92738 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC28.65■■■□□ 2.18
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms