Protein–RNA interactions for Protein: Q8TDI7

TMC2, Transmembrane channel-like protein 2, humanhuman

Predictions only

Length 906 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMC2Q8TDI7 HES6-205ENST00000409356 528 ntTSL 2 BASIC27.37■■□□□ 1.97
TMC2Q8TDI7 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC27.37■■□□□ 1.97
TMC2Q8TDI7 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC27.37■■□□□ 1.97
TMC2Q8TDI7 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
TMC2Q8TDI7 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC27.37■■□□□ 1.97
TMC2Q8TDI7 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
TMC2Q8TDI7 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
TMC2Q8TDI7 CHST11-202ENST00000546689 756 ntTSL 2 BASIC27.36■■□□□ 1.97
TMC2Q8TDI7 CR559946.2-201ENST00000623684 991 ntBASIC27.36■■□□□ 1.97
TMC2Q8TDI7 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC27.34■■□□□ 1.97
TMC2Q8TDI7 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
TMC2Q8TDI7 MIR3648-2-201ENST00000581792 180 ntBASIC27.34■■□□□ 1.97
TMC2Q8TDI7 MIR3648-1-201ENST00000615959 180 ntBASIC27.34■■□□□ 1.97
TMC2Q8TDI7 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
TMC2Q8TDI7 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC27.33■■□□□ 1.97
TMC2Q8TDI7 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC27.33■■□□□ 1.97
TMC2Q8TDI7 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC27.32■■□□□ 1.96
TMC2Q8TDI7 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC27.32■■□□□ 1.96
TMC2Q8TDI7 GDI1-215ENST00000630693 786 ntTSL 4 BASIC27.32■■□□□ 1.96
TMC2Q8TDI7 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
TMC2Q8TDI7 AC008813.1-201ENST00000536597 885 ntBASIC27.3■■□□□ 1.96
TMC2Q8TDI7 SHF-208ENST00000560734 1731 ntTSL 3 BASIC27.3■■□□□ 1.96
TMC2Q8TDI7 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
TMC2Q8TDI7 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
TMC2Q8TDI7 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC27.29■■□□□ 1.96
TMC2Q8TDI7 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC27.29■■□□□ 1.96
TMC2Q8TDI7 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
TMC2Q8TDI7 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC27.28■■□□□ 1.96
TMC2Q8TDI7 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC27.27■■□□□ 1.96
TMC2Q8TDI7 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC27.27■■□□□ 1.96
TMC2Q8TDI7 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
TMC2Q8TDI7 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC27.26■■□□□ 1.96
TMC2Q8TDI7 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
TMC2Q8TDI7 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
TMC2Q8TDI7 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
TMC2Q8TDI7 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC27.26■■□□□ 1.95
TMC2Q8TDI7 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
TMC2Q8TDI7 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
TMC2Q8TDI7 AC016575.1-201ENST00000607026 382 ntBASIC27.25■■□□□ 1.95
TMC2Q8TDI7 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC27.25■■□□□ 1.95
TMC2Q8TDI7 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC27.25■■□□□ 1.95
TMC2Q8TDI7 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC27.24■■□□□ 1.95
TMC2Q8TDI7 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC27.24■■□□□ 1.95
TMC2Q8TDI7 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC27.24■■□□□ 1.95
TMC2Q8TDI7 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
TMC2Q8TDI7 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
TMC2Q8TDI7 PVT1-219ENST00000523427 938 ntTSL 3 BASIC27.23■■□□□ 1.95
TMC2Q8TDI7 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC27.23■■□□□ 1.95
TMC2Q8TDI7 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
TMC2Q8TDI7 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
TMC2Q8TDI7 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC27.21■■□□□ 1.95
TMC2Q8TDI7 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC27.21■■□□□ 1.95
TMC2Q8TDI7 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
TMC2Q8TDI7 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC27.2■■□□□ 1.94
TMC2Q8TDI7 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC27.2■■□□□ 1.94
TMC2Q8TDI7 AC148477.6-201ENST00000623746 465 ntBASIC27.2■■□□□ 1.94
TMC2Q8TDI7 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC27.2■■□□□ 1.94
TMC2Q8TDI7 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
TMC2Q8TDI7 HLA-V-202ENST00000446817 847 ntBASIC27.19■■□□□ 1.94
TMC2Q8TDI7 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC27.19■■□□□ 1.94
TMC2Q8TDI7 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC27.18■■□□□ 1.94
TMC2Q8TDI7 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
TMC2Q8TDI7 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC27.17■■□□□ 1.94
TMC2Q8TDI7 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC27.17■■□□□ 1.94
TMC2Q8TDI7 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC27.16■■□□□ 1.94
TMC2Q8TDI7 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC27.16■■□□□ 1.94
TMC2Q8TDI7 CHST11-203ENST00000547956 936 ntTSL 2 BASIC27.16■■□□□ 1.94
TMC2Q8TDI7 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC27.16■■□□□ 1.94
TMC2Q8TDI7 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC27.16■■□□□ 1.94
TMC2Q8TDI7 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
TMC2Q8TDI7 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
TMC2Q8TDI7 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
TMC2Q8TDI7 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC27.15■■□□□ 1.94
TMC2Q8TDI7 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
TMC2Q8TDI7 METRNL-202ENST00000570778 967 ntTSL 5 BASIC27.14■■□□□ 1.94
TMC2Q8TDI7 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC27.14■■□□□ 1.94
TMC2Q8TDI7 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC27.14■■□□□ 1.93
TMC2Q8TDI7 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC27.14■■□□□ 1.93
TMC2Q8TDI7 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
TMC2Q8TDI7 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
TMC2Q8TDI7 MIR219A2-201ENST00000608502 1504 ntBASIC27.13■■□□□ 1.93
TMC2Q8TDI7 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC27.13■■□□□ 1.93
TMC2Q8TDI7 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC27.13■■□□□ 1.93
TMC2Q8TDI7 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
TMC2Q8TDI7 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC27.12■■□□□ 1.93
TMC2Q8TDI7 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
TMC2Q8TDI7 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC27.12■■□□□ 1.93
TMC2Q8TDI7 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC27.12■■□□□ 1.93
TMC2Q8TDI7 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC27.12■■□□□ 1.93
TMC2Q8TDI7 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC27.12■■□□□ 1.93
TMC2Q8TDI7 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC27.11■■□□□ 1.93
TMC2Q8TDI7 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
TMC2Q8TDI7 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
TMC2Q8TDI7 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC27.1■■□□□ 1.93
TMC2Q8TDI7 MIR639-201ENST00000384974 98 ntBASIC27.1■■□□□ 1.93
TMC2Q8TDI7 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
TMC2Q8TDI7 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC27.1■■□□□ 1.93
TMC2Q8TDI7 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC27.09■■□□□ 1.93
TMC2Q8TDI7 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC27.09■■□□□ 1.93
TMC2Q8TDI7 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC27.09■■□□□ 1.93
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms