Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC40.07■■■■■ 4.01
CFAP43Q8NDM7 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC40.07■■■■■ 4
CFAP43Q8NDM7 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC40.06■■■■■ 4
CFAP43Q8NDM7 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC40.06■■■■■ 4
CFAP43Q8NDM7 TRIR-205ENST00000592273 783 ntTSL 3 BASIC40.04■■■■■ 4
CFAP43Q8NDM7 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC40.03■■■■■ 4
CFAP43Q8NDM7 AL035685.1-201ENST00000636663 812 ntBASIC40.03■■■■■ 4
CFAP43Q8NDM7 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC40.03■■■■■ 4
CFAP43Q8NDM7 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC40.02■■■■■ 4
CFAP43Q8NDM7 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC40.02■■■■■ 4
CFAP43Q8NDM7 MEST-211ENST00000437945 1455 ntTSL 5 BASIC40.02■■■■■ 4
CFAP43Q8NDM7 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC40.02■■■■■ 4
CFAP43Q8NDM7 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC40.02■■■■■ 4
CFAP43Q8NDM7 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC40.01■■■■■ 4
CFAP43Q8NDM7 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC40.01■■■■■ 4
CFAP43Q8NDM7 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC40.01■■■■■ 4
CFAP43Q8NDM7 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC40.01■■■■■ 4
CFAP43Q8NDM7 HES4-204ENST00000484667 667 ntTSL 3 BASIC40.01■■■■■ 4
CFAP43Q8NDM7 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC40.01■■■■□ 3.99
CFAP43Q8NDM7 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC40■■■■□ 3.99
CFAP43Q8NDM7 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC40■■■■□ 3.99
CFAP43Q8NDM7 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC40■■■■□ 3.99
CFAP43Q8NDM7 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC40■■■■□ 3.99
CFAP43Q8NDM7 AC110285.7-201ENST00000624417 1536 ntBASIC40■■■■□ 3.99
CFAP43Q8NDM7 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC39.99■■■■□ 3.99
CFAP43Q8NDM7 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC39.99■■■■□ 3.99
CFAP43Q8NDM7 AL157400.5-201ENST00000507624 621 ntBASIC39.99■■■■□ 3.99
CFAP43Q8NDM7 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC39.98■■■■□ 3.99
CFAP43Q8NDM7 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC39.97■■■■□ 3.99
CFAP43Q8NDM7 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC39.97■■■■□ 3.99
CFAP43Q8NDM7 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC39.96■■■■□ 3.99
CFAP43Q8NDM7 RPS2-210ENST00000530225 765 ntTSL 2 BASIC39.96■■■■□ 3.99
CFAP43Q8NDM7 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC39.96■■■■□ 3.99
CFAP43Q8NDM7 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC39.96■■■■□ 3.99
CFAP43Q8NDM7 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC39.96■■■■□ 3.99
CFAP43Q8NDM7 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC39.95■■■■□ 3.99
CFAP43Q8NDM7 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC39.95■■■■□ 3.99
CFAP43Q8NDM7 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC39.95■■■■□ 3.99
CFAP43Q8NDM7 AP004833.2-201ENST00000532228 1454 ntBASIC39.94■■■■□ 3.98
CFAP43Q8NDM7 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC39.94■■■■□ 3.98
CFAP43Q8NDM7 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC39.93■■■■□ 3.98
CFAP43Q8NDM7 MIR219A2-201ENST00000608502 1504 ntBASIC39.93■■■■□ 3.98
CFAP43Q8NDM7 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC39.93■■■■□ 3.98
CFAP43Q8NDM7 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC39.92■■■■□ 3.98
CFAP43Q8NDM7 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC39.92■■■■□ 3.98
CFAP43Q8NDM7 ECEL1P2-201ENST00000461596 1295 ntBASIC39.92■■■■□ 3.98
CFAP43Q8NDM7 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC39.92■■■■□ 3.98
CFAP43Q8NDM7 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC39.92■■■■□ 3.98
CFAP43Q8NDM7 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC39.91■■■■□ 3.98
CFAP43Q8NDM7 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC39.91■■■■□ 3.98
CFAP43Q8NDM7 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC39.91■■■■□ 3.98
CFAP43Q8NDM7 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC39.91■■■■□ 3.98
CFAP43Q8NDM7 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC39.9■■■■□ 3.98
CFAP43Q8NDM7 MOB2-207ENST00000614710 705 ntTSL 5 BASIC39.9■■■■□ 3.98
CFAP43Q8NDM7 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC39.9■■■■□ 3.98
CFAP43Q8NDM7 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC39.89■■■■□ 3.98
CFAP43Q8NDM7 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC39.89■■■■□ 3.98
CFAP43Q8NDM7 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC39.89■■■■□ 3.98
CFAP43Q8NDM7 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC39.89■■■■□ 3.98
CFAP43Q8NDM7 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC39.89■■■■□ 3.98
CFAP43Q8NDM7 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC39.89■■■■□ 3.98
CFAP43Q8NDM7 AC129492.7-201ENST00000622992 756 ntBASIC39.89■■■■□ 3.98
CFAP43Q8NDM7 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC39.88■■■■□ 3.98
CFAP43Q8NDM7 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC39.88■■■■□ 3.98
CFAP43Q8NDM7 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC39.88■■■■□ 3.97
CFAP43Q8NDM7 AL592295.1-201ENST00000400984 884 ntBASIC39.88■■■■□ 3.97
CFAP43Q8NDM7 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC39.88■■■■□ 3.97
CFAP43Q8NDM7 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC39.88■■■■□ 3.97
CFAP43Q8NDM7 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC39.88■■■■□ 3.97
CFAP43Q8NDM7 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC39.86■■■■□ 3.97
CFAP43Q8NDM7 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC39.86■■■■□ 3.97
CFAP43Q8NDM7 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC39.83■■■■□ 3.97
CFAP43Q8NDM7 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC39.83■■■■□ 3.97
CFAP43Q8NDM7 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC39.83■■■■□ 3.97
CFAP43Q8NDM7 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC39.82■■■■□ 3.97
CFAP43Q8NDM7 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC39.82■■■■□ 3.97
CFAP43Q8NDM7 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC39.82■■■■□ 3.96
CFAP43Q8NDM7 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC39.82■■■■□ 3.96
CFAP43Q8NDM7 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC39.81■■■■□ 3.96
CFAP43Q8NDM7 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC39.81■■■■□ 3.96
CFAP43Q8NDM7 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC39.8■■■■□ 3.96
CFAP43Q8NDM7 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC39.79■■■■□ 3.96
CFAP43Q8NDM7 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC39.79■■■■□ 3.96
CFAP43Q8NDM7 ST7-202ENST00000323984 2142 ntTSL 5 BASIC39.79■■■■□ 3.96
CFAP43Q8NDM7 ST7-207ENST00000393449 2127 ntTSL 5 BASIC39.79■■■■□ 3.96
CFAP43Q8NDM7 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC39.79■■■■□ 3.96
CFAP43Q8NDM7 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC39.79■■■■□ 3.96
CFAP43Q8NDM7 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC39.79■■■■□ 3.96
CFAP43Q8NDM7 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC39.79■■■■□ 3.96
CFAP43Q8NDM7 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC39.79■■■■□ 3.96
CFAP43Q8NDM7 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC39.78■■■■□ 3.96
CFAP43Q8NDM7 ST7-205ENST00000393446 2114 ntTSL 5 BASIC39.78■■■■□ 3.96
CFAP43Q8NDM7 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC39.78■■■■□ 3.96
CFAP43Q8NDM7 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC39.78■■■■□ 3.96
CFAP43Q8NDM7 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC39.77■■■■□ 3.96
CFAP43Q8NDM7 AC007029.1-201ENST00000604183 313 ntBASIC39.77■■■■□ 3.96
CFAP43Q8NDM7 AC100797.4-201ENST00000631653 1827 ntBASIC39.77■■■■□ 3.96
CFAP43Q8NDM7 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC39.76■■■■□ 3.96
CFAP43Q8NDM7 AL592293.1-201ENST00000502889 1188 ntBASIC39.76■■■■□ 3.96
CFAP43Q8NDM7 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC39.75■■■■□ 3.95
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms