Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC16.84■□□□□ 0.29
LINC01561Q8N1V8 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC16.84■□□□□ 0.29
LINC01561Q8N1V8 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LINC01561Q8N1V8 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LINC01561Q8N1V8 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LINC01561Q8N1V8 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LINC01561Q8N1V8 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LINC01561Q8N1V8 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
LINC01561Q8N1V8 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC16.82■□□□□ 0.28
LINC01561Q8N1V8 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC16.82■□□□□ 0.28
LINC01561Q8N1V8 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC16.82■□□□□ 0.28
LINC01561Q8N1V8 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
LINC01561Q8N1V8 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC16.82■□□□□ 0.28
LINC01561Q8N1V8 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
LINC01561Q8N1V8 AC145676.1-201ENST00000514988 2004 ntBASIC16.82■□□□□ 0.28
LINC01561Q8N1V8 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LINC01561Q8N1V8 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
LINC01561Q8N1V8 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
LINC01561Q8N1V8 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
LINC01561Q8N1V8 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LINC01561Q8N1V8 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LINC01561Q8N1V8 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LINC01561Q8N1V8 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LINC01561Q8N1V8 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
LINC01561Q8N1V8 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LINC01561Q8N1V8 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC16.8■□□□□ 0.28
LINC01561Q8N1V8 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC16.8■□□□□ 0.28
LINC01561Q8N1V8 WHAMMP2-203ENST00000563942 1603 ntBASIC16.8■□□□□ 0.28
LINC01561Q8N1V8 AL449106.1-201ENST00000608517 1980 ntBASIC16.8■□□□□ 0.28
LINC01561Q8N1V8 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LINC01561Q8N1V8 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LINC01561Q8N1V8 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC16.79■□□□□ 0.28
LINC01561Q8N1V8 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LINC01561Q8N1V8 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LINC01561Q8N1V8 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
LINC01561Q8N1V8 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LINC01561Q8N1V8 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LINC01561Q8N1V8 AC005559.1-201ENST00000589661 871 ntBASIC16.79■□□□□ 0.28
LINC01561Q8N1V8 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LINC01561Q8N1V8 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LINC01561Q8N1V8 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LINC01561Q8N1V8 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LINC01561Q8N1V8 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC16.78■□□□□ 0.28
LINC01561Q8N1V8 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
LINC01561Q8N1V8 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LINC01561Q8N1V8 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LINC01561Q8N1V8 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC16.77■□□□□ 0.28
LINC01561Q8N1V8 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LINC01561Q8N1V8 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
LINC01561Q8N1V8 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
LINC01561Q8N1V8 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LINC01561Q8N1V8 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC16.76■□□□□ 0.27
LINC01561Q8N1V8 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
LINC01561Q8N1V8 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LINC01561Q8N1V8 HNRNPLP2-201ENST00000568980 1570 ntBASIC16.75■□□□□ 0.27
LINC01561Q8N1V8 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LINC01561Q8N1V8 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
LINC01561Q8N1V8 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
LINC01561Q8N1V8 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
LINC01561Q8N1V8 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC16.74■□□□□ 0.27
LINC01561Q8N1V8 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
LINC01561Q8N1V8 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LINC01561Q8N1V8 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LINC01561Q8N1V8 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC16.73■□□□□ 0.27
LINC01561Q8N1V8 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC16.73■□□□□ 0.27
LINC01561Q8N1V8 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LINC01561Q8N1V8 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
LINC01561Q8N1V8 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LINC01561Q8N1V8 DUSP8P4-201ENST00000399538 1761 ntBASIC16.73■□□□□ 0.27
LINC01561Q8N1V8 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LINC01561Q8N1V8 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
LINC01561Q8N1V8 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LINC01561Q8N1V8 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC16.71■□□□□ 0.27
LINC01561Q8N1V8 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
LINC01561Q8N1V8 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LINC01561Q8N1V8 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC16.71■□□□□ 0.27
LINC01561Q8N1V8 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC16.71■□□□□ 0.27
LINC01561Q8N1V8 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LINC01561Q8N1V8 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC16.7■□□□□ 0.26
LINC01561Q8N1V8 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LINC01561Q8N1V8 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
LINC01561Q8N1V8 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC16.7■□□□□ 0.26
LINC01561Q8N1V8 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LINC01561Q8N1V8 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LINC01561Q8N1V8 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
LINC01561Q8N1V8 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LINC01561Q8N1V8 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
LINC01561Q8N1V8 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LINC01561Q8N1V8 MIR6090-201ENST00000622481 60 ntBASIC16.68■□□□□ 0.26
LINC01561Q8N1V8 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
LINC01561Q8N1V8 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LINC01561Q8N1V8 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LINC01561Q8N1V8 AC092803.2-201ENST00000564287 1899 ntBASIC16.67■□□□□ 0.26
LINC01561Q8N1V8 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LINC01561Q8N1V8 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC16.67■□□□□ 0.26
LINC01561Q8N1V8 CALM3-209ENST00000597743 577 ntTSL 4 BASIC16.67■□□□□ 0.26
LINC01561Q8N1V8 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC16.67■□□□□ 0.26
LINC01561Q8N1V8 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC16.67■□□□□ 0.26
LINC01561Q8N1V8 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC16.66■□□□□ 0.26
LINC01561Q8N1V8 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 8.1 ms